Thiohalocapsa sp. PB-PSB1: N838_21705
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Entry
N838_21705 CDS
T07019
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thip03032
]
N838_21705 (gyrA)
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_21705 (gyrA)
Enzymes [BR:
thip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N838_21705 (gyrA)
DNA replication proteins [BR:
thip03032
]
Prokaryotic type
DNA Topoisomerases
N838_21705 (gyrA)
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N838_21705 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
RPN6_N
Motif
Other DBs
NCBI-ProteinID:
QQO55568
LinkDB
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Position
complement(5153230..5155965)
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AA seq
911 aa
AA seq
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MADFAKEVLTVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWN
KPYKKSARIVGDVIGKYHPHGDTAVYDTMVRMAQSFSMRYMLIDGQGNFGSVDGDSPAAM
RYTEVRMARIAHSLLDDLDKETVDFTPNYDESEQEPSVLPARFPNLLVNGSAGIAVGMAT
NIPPHNLGEVIDACLALIDDPLVDVARLLEIVPGPDFPTAATINGVRGIREAYLTGRGRI
QIRARTHVETEKRSGREAIIVDELPYQVNKAKLLEKMAELVKEKKLEGIAELRDESDKDG
MRMVIEIKRDYYPDVVLNNLFQHTQMQTVFGINMVALVDGQPRILNLKQMLEYFLRHRRD
VVTRRTIFELRKARDRAHLLEGYTVALANIDEVIALIKASASPAQAREDLMRRTWASGAL
SGMLERAGAAETRPDDLDAEFGLLRDGAEDGRRYRLSERQARAILDLQLQRLTGLEQDKI
VKEFEDILIKIGGLLDILRNPDRLMQVIRDELVSIRDQYADARRTEIVRDHTDLTLLDLI
APEDVVVTMSHAGYVKAQPLSEYQAQRRGGKGRSAASTKDEDFIDRLFVANSHDTVLCFS
SQGKVYWLKVYELPQAGHNARGRPIVNLLALDPGERINATLPVPEYEEGSFVFMATSKGT
VKKTPLSDFSRPLARGIIAIDLHADERLIGVAVSDGRQDMMLFTSAGKAVRFNESTVRSM
GRTAHGVRGVWLDENQRVISLLVAEPGTVLTVGTDGYGKRTPVEEFPTRGRGAKGVISMR
INEDNGEQVGAVLVRPGDEIMLITEAGTLVRTGVDGISILGRNTRGVRLINLGEHQRLAG
IERVVALNGGADDANGADVTGSVAPPVPSALEPNADLQDIDAGSGQAPGDVSDDSPDSGS
ESAADEPDGID
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttcgcaaaagaggtcctcaccgttaatctcgaagacgagatgcgccagtcg
tatctcgattacgcgatgagcgtgatcgttggtcgcgcattaccggacgtgcgcgatggg
ctcaaacccgtacatcgtcgcgtgctgtttgcgatgaacgagttaggtaatgattggaat
aagccgtacaaaaagtccgcgcgtatcgtcggcgatgtgatcggtaagtaccatccgcat
ggcgatacggctgtgtacgataccatggtccgcatggcgcagtctttctcgatgcgctac
atgctgatcgacggacagggtaacttcggctcggtcgacggcgattcgccggcggccatg
cgttacaccgaggtgcgcatggcgcgcattgcgcatagcctgctcgacgacttggacaag
gaaaccgtcgacttcacgccgaattacgacgaatcggaacaggaaccgagcgttctgccg
gcgcgcttccccaacctgctggttaatggctccgccgggatcgcggttggcatggccacc
aacattcccccgcacaatctgggcgaagtgattgatgcctgcttggcgctcatcgacgac
ccgctggttgatgtggcgcggctgctggaaatcgtacccgggccagacttcccgaccgcc
gcgacgatcaacggcgtgcgtggtattcgcgaagcctatctcaccgggcgcgggcgtatc
cagattcgagcccgcacccatgtcgagaccgaaaagcgcagcgggcgcgaggcgatcatc
gttgatgaattgccgtatcaggtgaataaggcaaagctgctggagaagatggccgagctg
gtcaaggagaaaaaactcgagggtatcgcggaactgcgcgacgagtcggacaaggatggc
atgcgcatggtcatcgagatcaagcgcgactactatccggacgtggtgctgaacaaccta
tttcagcatacccagatgcagactgtgttcggtatcaatatggtcgccttggtcgacggc
cagccgcgcattctcaatctcaagcagatgctggagtatttcctccggcaccgtcgcgac
gtcgtcacccgacgcaccatcttcgaattacgcaaggcgcgcgatcgggctcacctgttg
gagggctatacggttgcgttggccaacatcgatgaggtcatcgcgctgatcaaggcatct
gccagtccggcgcaagcccgcgaggatctgatgagacgcacctgggcttccggtgccctg
tccggcatgctcgagcgtgccggcgctgccgagactcgcccggacgatctcgatgccgag
ttcggcctgctccgagacggagccgaggacggccgccgataccggctcagcgaacgccag
gcgcgtgccatcctcgatttgcagttgcagcgcctgaccgggctggaacaggacaagatc
gttaaggagttcgaggatatcctaatcaagattggcgggttgctcgatatcctgcgcaat
cctgaccggctcatgcaagtgattcgcgatgagctggtctcaatacgcgatcaatacgcc
gatgcccgccgtaccgagatcgtgcgcgatcatacagatttgactctgttggatctgatc
gcacccgaggacgtggttgtgaccatgtcgcatgccggttatgtcaaagcgcagccgtta
tcggagtatcaggctcagcgtcgtggcggcaagggccgcagcgcggccagcaccaaagac
gaggactttatcgatcggctgttcgtcgctaactcccatgacaccgtattgtgtttttcc
agtcagggcaaggtgtactggttgaaagtttacgaattgccgcaggctggtcataacgcc
cgcggccggcctattgtcaatctgctggcgttggacccgggcgagcgcatcaatgcgacg
ctgccggtgccggagtatgaagaaggcagctttgtgtttatggcgaccagcaagggcacg
gttaagaaaacgcctttatcggatttctcgcgtccgcttgcccgcggcatcatcgcgatc
gatttgcacgccgatgagcgactcatcggtgttgcagtcagcgatggtcgtcaggacatg
atgttgtttacatccgccgggaaggcagtgcgttttaacgagagcacggtacgctcgatg
ggacgaactgctcatggtgtccgtggcgtttggctggatgagaaccagcgcgtgatctca
ctgctggtcgccgagcctggcacggtgctgacggttggtaccgacggttatggcaagcgc
acgccggtggaagaattcccgacccgtggtcgcggcgccaagggcgtcatttccatgcgc
atcaacgaggacaatggcgagcaagtgggtgcggtactggttcgacccggcgatgagatt
atgctcatcaccgaagctggcactttggtgcgcaccggcgttgacggcatctcgattttg
ggtcgcaacacccgaggcgtcaggctgatcaacctgggtgagcatcagcgcctggctggt
attgagcgtgtggtcgccctcaatggcggggctgatgatgccaacggagcagatgtcacg
ggcagtgttgccccgcctgttcctagtgctctggagcccaatgccgacctccaggatatt
gatgccggctcggggcaggccccgggggatgtttcggatgacagcccagattccggatcg
gaatccgctgcggacgagcccgatggcatcgattga
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