Thiohalocapsa sp. PB-PSB1: N838_22480
Help
Entry
N838_22480 CDS
T07019
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thip03021
]
N838_22480 (rpoH)
Transcription machinery [BR:
thip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N838_22480 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_10
KORA
Sigma70_r1_2
HTH_3
DUF7769
ENT
Motif
Other DBs
NCBI-ProteinID:
QQO55703
LinkDB
All DBs
Position
complement(5305982..5306842)
Genome browser
AA seq
286 aa
AA seq
DB search
MTDTTTTDIAAIGSLSTGTIDAYISSAYQIPVLTLDEERELALRLRDNNDMMAARRLVLS
HLRFVIRIARGYLGYGLPLPDLIQEGTVGLMKAVRRFEPDVGVRLVSFAVHWIRAEIHEY
ILRNWRIVKVATTKAQRKLFFNLRSSKKRLGWFTKQEVDDVAADLGVKPETVLEMESRLS
SHDMSFDGYDDEEDDGPSAPSTYLPDLSMEPASALEREDSSSYQRDRLFAALEGLDERSK
TILRERWLNEKKQTLHELAQQFGVSAERIRQIEKNAMNKLRVQLEC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacaacgaccactgacatcgccgcgattggttcgttatcgacgggaaccatt
gatgcctacatctcgagtgcctatcagattccggtgttgacccttgatgaagagcgagag
cttgctctgcggttgcgcgacaacaatgacatgatggcagcacgtcggctcgtcctatcc
catctacgctttgtcattcgtatcgcccgcggttacttaggctacggtctacctttgccg
gacctgattcaggaaggcactgttggtctgatgaaagccgtccgtcgcttcgaacccgat
gttggcgtacgcctggtatcttttgctgtgcactggattcgcgcggaaattcacgaatat
atcctgcgaaactggcgtatcgtcaaagttgccaccaccaaagcgcagcgtaagctattc
ttcaacctgcgtagctcgaaaaagcgtctaggatggttcaccaagcaggaagttgatgat
gtcgccgcggatctaggcgtcaagcccgagacagtgctggagatggagtcgcggctgtcg
agccatgatatgtccttcgacggctacgacgatgaagaggacgatggtccttcggcccca
tccacctacctgccggacctgagcatggaacctgccagtgccctagaacgtgaagatagc
agcagttaccagcgtgatcgcttgttcgccgccttagaggggttggacgagcggagtaaa
acaattctgcgcgagcgctggctgaatgaaaagaagcaaaccctacatgaactggctcag
caattcggtgtctccgcggagcgcatacgccagatcgagaaaaatgccatgaacaaatta
cgggtgcaattggagtgctga
DBGET
integrated database retrieval system
