KEGG   Thiohalocapsa sp. PB-PSB1: N838_22730
Entry
N838_22730        CDS       T07019                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
thip  Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:thip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thip02048]
    N838_22730
Enzymes [BR:thip01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     N838_22730
Prokaryotic defense system [BR:thip02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   N838_22730
SSDB
Motif
Pfam: ResIII Helicase_C YagJ
Other DBs
NCBI-ProteinID: QQO55748
LinkDB
Position
complement(5363857..5366985)
AA seq 1042 aa
MPAPNEVESPIINSPFAEPAVHWQIERGKQPVQAVGRRPASYFYRVPESSGRGRKSKKQL
SLGGDLDVGEQEDLPLVNWLRMRVKEWRDGARTGIPYDGASRISKELLVLWRGDETLRKQ
RLFFAQVEAAETIIFLTEANPIYHDGMPKLPIDQPGESAREAGFKAFTRYACKIATGTGK
TTVMGMLSAWSILNRVASPTDDRFSDTVLIVCPNVTIRERLQELDPALGDSSLYRTRQLV
PPHRMEDLRRGEVMIANWHRLAKKETSSVNGTSAKVVKTGEATEVVRNAGKANASVETKY
FESDRAWFQRIRQELGSGKGRSPHWLLFNDEAHHAYRRGDTESVIDLEEDRSLAKKNAKE
ATIWIEGLDRINRLAGGRKKGIRFCIDLSATPFYIQGSGNEVGKPFPWIVSDFGLLDAIE
SGLVKIPQLPTRDISGASEASYFNVWRWVEARAEQDGLGKSITPRIVMTYATAPINQLAQ
DWHTRFEQWQQDSRDEPHPVPPVFIVVCRDTKVAAEVYNWLAFESGGYGPAPTWFRNTTG
DEVTVRVDSKVVEDMEAGGTKDETQRLRFILDTIGKKTWPGAKVPEAWSELVRKNNEKAA
SDDNDGSYKWIDERVPPGRNIRCIVSVAMLAEGWDANTVTHIVGLRPFGSQLLCEQVVGR
ALRRRSYALNQETDQFEEETAKVFGVPFELIPFKVSKSQDSKPPKEPNHIFSDPDKSQYE
IEFPLVAGYYSPQVFELQIAWDQVSQVTVDPKEIPNSVQLNAMTAPEGALAVYGPGERPV
LTLAEWRRQFRLQQVAFRLAREVCKRWESEQHADADAEAATSTAMLFPKVAFAAKRFLQE
RLICIGNADPRDVLLAGKYHQQTVDILFEAIRKGGVTRTRELPRIAKGSAGRGSTRFVDY
HTTKDVYPVNGCHLNAMVADTKQWEQSAGYALDTHPGVVRWVKNEHLGFFMPYRKNGIPA
RYIPDFIAVLDIGLTLVIETKGRYGDDADLKAKAAERWVNAVNEDGSWGLWRYLVVKDPT
ELPRRLDENALAKWDQQAGVAL
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgcccgccccaaacgaggtcgagagccccatcatcaactcgcccttcgccgagccggcg
gtccattggcagatcgagcgcggcaagcagccggtgcaggccgtcggacggcggccggcg
agttatttctatcgcgtacccgagagcagcgggcgaggtcgaaagagcaagaaacagctc
agccttggcggtgatctcgacgttggtgagcaggaggacctgccgctggtcaattggctg
cgcatgcgggtgaaagagtggcgcgatggggcacggaccggcatcccctacgatggggca
tcgcgcatcagcaaggagctgctggtcctgtggcgcggagacgagacgttgcgcaagcag
cggctcttttttgcccaggtcgaggcggcagagacaatcatctttctgaccgaggcgaat
ccgatctaccacgacggcatgcccaagctgcccatcgaccagcccggtgagagcgcgcgc
gaggcgggcttcaaggcatttacacgctatgcctgcaagatagccaccggcaccggcaag
accacggtgatggggatgctttcggcctggtcgatcctgaaccgggtggcgtcgccgacg
gacgatcgcttttccgacaccgtcttgatcgtctgtcccaacgtgaccatccgcgagcgg
ctgcaggaactcgaccccgcactgggcgacagcagcctgtatcgcacgcgccagctggtc
ccgccccatcggatggaggacctccggcggggcgaggtgatgatcgccaactggcatcgg
ttggcgaagaaggagaccagcagcgtcaacggcacctcggccaaggtggtcaagaccggc
gaggcgaccgaggtggtcaggaacgcgggcaaggcaaacgcatcggtggagaccaagtat
ttcgagtcggaccgggcctggttccagcgtatccgtcaggagctgggctccggcaagggg
cgcagcccccactggctattgttcaatgacgaggcacaccacgcctaccgccgcggcgac
accgaatcggtcatcgatctggaagaggaccgctcgttggccaagaagaacgccaaggag
gcgaccatctggatcgagggtctggaccggatcaaccggctggcaggcgggcgcaagaag
ggcattcggttttgtatcgacctgtcggcgacgcccttctatatccaagggtccggcaac
gaggtgggcaagccattcccttggatcgtctccgatttcgggctgctggacgccatcgaa
tcgggcctggtgaagatcccgcaactgccgacccgcgacatcagcggcgcgagcgaggcc
agttacttcaacgtctggcgctgggtcgaggcgcgggcggagcaggatggactgggaaag
tcgatcacgccgcggatcgtgatgacctatgcgaccgcgccgatcaaccaactggcgcag
gattggcatacccgcttcgagcagtggcagcaggatagtcgcgatgagccgcatccggtg
ccgccggtgttcatcgtggtttgccgcgataccaaggtcgcggcggaggtttataactgg
ctcgcctttgagtccggcgggtacggccctgcaccgacgtggtttcgcaacacgaccggc
gacgaggtcacggtccgggtcgattccaaggtggtggaagacatggaagccgggggaacc
aaagacgagacgcaacgactgcgcttcatcctcgataccatcggcaagaagacctggccg
ggcgccaaggtgcccgaggcctggtcggaactggtccgcaagaacaacgagaaggccgcg
tccgatgacaacgacggcagctacaaatggatcgacgagcgggtgcctccggggcgcaac
atccgctgcatcgtctcggtggcgatgctggccgagggctgggacgccaataccgtgacc
cacattgtcggcttgcgacccttcggttcccaattgctgtgcgagcaggtggtggggcgt
gcgctgcgacgccgcagttatgcgctcaaccaagagaccgaccagttcgaggaggagacg
gccaaggtcttcggggtgccgttcgagctgattccgttcaaggtctccaagtcgcaggac
agcaagcctcccaaggagccgaaccacatcttcagcgacccggacaaatcgcagtacgag
atcgagttcccgctggtggccggctattacagtccgcaggtgttcgagctgcagatcgcc
tgggaccaagtctctcaggtcaccgtcgatcccaaggagatcccgaactcggtccagctg
aatgccatgacggcgcccgaaggcgcgttggcggtctatggtcctggcgagcggcccgtg
ttgaccctggcggagtggcgccggcagtttcggcttcaacaggtggcgttccgactcgcc
cgcgaggtctgcaagcggtgggagagcgagcagcacgccgacgcagacgcggaggcggcg
acatccacggcgatgctgtttccgaaggtcgcctttgcggcgaagcgtttcctgcaggag
aggctgatctgcatcggcaatgccgacccgcgggatgtcctgctcgctggcaagtatcac
cagcagacggtggatatcctattcgaggcgatccgcaagggcggcgttacccgcacgcga
gagctaccgcggatcgccaaggggtccgccgggcggggaagcacccgcttcgtcgactac
cacaccacaaaggacgtctatccggtcaacggctgccatctgaacgcgatggtcgccgac
accaagcaatgggagcagagcgcgggctatgcgctggacacccatcccggtgtggtgcgc
tgggtcaagaacgagcacctcggatttttcatgccctatcgaaagaacggcatccccgcg
cgctacattcccgacttcatcgccgtcttggatatcggcctgacgctggtgatcgagacc
aagggacggtatggtgacgacgcggatctgaaagccaaggcggctgagcgctgggtcaac
gccgtcaacgaggacggcagctggggcttgtggcggtacctggtcgtgaaggacccgaca
gagttgccgcggcgactggatgagaatgcactggcgaagtgggaccagcaggccggggtt
gcgctgtag

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