Thiohalocapsa sp. PB-PSB1: N838_23400
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Entry
N838_23400 CDS
T07019
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00630
Glyoxylate and dicarboxylate metabolism
thip00710
Carbon fixation by Calvin cycle
thip01100
Metabolic pathways
thip01110
Biosynthesis of secondary metabolites
thip01120
Microbial metabolism in diverse environments
thip01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N838_23400
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
N838_23400
Enzymes [BR:
thip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
N838_23400
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QQO55849
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Position
complement(5504267..5505682)
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AA seq
471 aa
AA seq
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MSVKTYDAGVKEYRDMYWTPDYVPLDTDLLACFKVTGQPGVPREEVAAAVAAESSTGTWS
TVWSELLTDLEYYKGRAYRIEDVPGDSESFYAFVAYPIDLFEEGSVVNVLTSLVGNVFGF
KALRHLRLEDIRFPIAYIKTCNGPPNGIQVERDKMNKYGRPMLGATIKPKLGLSAKNYGR
AVYECLRGGLDFTKDDENVNSQPFMRWQNRFEFVAEAVQSAQQETGERKGHYLNVTAATP
EDMYERAEFAKEVGAPIIMHDFLTGGFTANTGLAKWCRRNGMLLHIHRAMHAVIDRHPKH
GIHFRVLAKCLRLSGGDHLHTGTVVGKLEGDRASTLGFVDQLREAFVPEDRSRGVFFDQD
WGSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTQGHPWGNAAGAAANRVSLEAC
VKARNEGRELEKESREIMVEAAQHSPELAIAMETWKEIKFEFDTVDKLDVK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaagacctacgacgccggtgttaaagaataccgggacatgtattggacgccg
gactacgttccgctggacacggatctgttagcctgctttaaggtgaccggccagccgggc
gtgccacgcgaagaggttgccgcggcggttgctgccgaatcttcaaccggtacctggtcg
acggtttggtcggaattgttgacagatctggaatattacaagggtcgtgcttatcgcatc
gaggatgtaccgggagatagcgagtcattctatgccttcgtcgcctatccgatcgatctg
ttcgaagaaggctccgtggtcaatgtgctgacctcgctggttggtaatgtattcggcttc
aaggctctgcgtcacctgcgcctggaagacatccgcttcccgatcgcctacatcaagacc
tgtaatggaccgcccaatggtattcaggtcgaacgcgacaaaatgaataagtacggccgg
ccgatgctgggcgcaaccatcaaaccgaagctgggtctgtctgcgaagaactacggtcgt
gccgtctacgaatgtttgcgtggcggtctggacttcaccaaagacgacgagaacgtcaac
agccagccctttatgcgttggcagaaccgttttgagttcgttgccgaggcggtgcagtcc
gcacagcaggagaccggcgagcgcaagggtcattacctgaatgtgaccgctgccacgcct
gaagatatgtacgagcgtgccgaattcgccaaggaagtcggcgcaccgatcatcatgcat
gattttctgaccggcggctttaccgcgaataccggtttggccaagtggtgccgcagaaac
ggtatgctcttgcacattcaccgtgccatgcacgcggtaatcgaccgccatcccaagcac
ggcatccacttccgcgtgctggccaagtgcctgcgcctgtccggtggcgaccatctgcat
accggaaccgtggtcggtaagctggaaggcgaccgcgcttccaccctcggctttgtcgat
cagctgcgcgaggcattcgtgcctgaggatcgctcgcgtggcgtctttttcgatcaggac
tggggctctatgcccggcgtctttgcagtagcctcaggtggtattcacgtttggcatatg
ccggcgctggtaaccatttttggcgacgactcggtgctgcagttcggtggcggtacccag
ggccatccttggggcaatgctgccggcgccgcggccaaccgcgtttcgctggaagcctgt
gtcaaggctcgcaatgaaggtcgcgagttggagaaggaatcccgcgagatcatggtcgag
gccgcgcagcacagtcctgaattggccatcgccatggagacctggaaagaaatcaagttc
gagttcgataccgtcgacaagctcgatgtgaaataa
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