Thiohalocapsa sp. PB-PSB1: N838_24405
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Entry
N838_24405 CDS
T07019
Name
(GenBank) DEAD/DEAH box helicase
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Glyco_hydro_63
Motif
Other DBs
NCBI-ProteinID:
QQO56023
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Position
complement(5805885..5809049)
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AA seq
1054 aa
AA seq
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MSGRLLDLIAPTRADALRQASRAQIHRELLERSLDEDTQLIARAAEALELAVLDLLSAAD
NDDEQAQRDLRLCAADAFRLLRALPRPTDSVEAAAFLLRGGALAVLGDKGADAARWLSEE
PWPELAPETADWRTQTWSTILDVWLRLIRKRGWTDRDAVLEGVARLRDAQTEFEQQYLEG
QDPAMAKAAALELIGLYHLAKAAEILALYITDGVVDGKYQIQQLLETHFDRVLTICQHAQ
MLDLEPLSRLLAASAEQMAENSIWTVTRAVNSRVTQFVRTLVDRGRGDRAIFDVLPPQRR
TLAERGLLGSSRRAVVVSLPTSSGKTLIAQFRILQALNQFEMERGWVAYLAPTRTLVNQI
ARRLRKEFEPLDIVVEQVSPAIEVDNIEAELLRQSDPSAAFRVLVTTPEKLDLMLRQGWE
AEIDRPLTLVVVDEAHNLSHFNRGLKLELLLATINSECQRAQFLLLTPFISNAREVARWL
GGANSEDVSLALDWQPNDRVIGIVEPEKGERINGRSYNYSLRMKTQHTTRQTLTVDELLR
FPKSDQIAATFSKVSDQGTLAAVTAQQMQRRGPVIVMHQRPDWVWSLADKLRIDANRRQA
MSERIGLVLAFLDLEMGTDFPLQDLLAHGIGIHHAGLSEDVCALMEWLFEEDELSFLVAT
TTIAQGVNFPVTGVVLASHQYPYGMDMPPEDFWNIAGRAGRIGQGSLGVVALVAANQAKA
DRLRIFINRQTGDLNSALIALATDAADQLGDLRGIVYSHPKWSAFVQYLAHTYRQMGQPE
GFADEIEQILRGTFGFDRLRAQHVGLASRLLDGVHAYSAYLGEPGQPLKLVDSTGFSLQT
VKTVLKAARECNVSADSWDKDRLFSKQDNELQNMMGVLLRVPELRENLKAATGGGDGDGD
KLAMIVKDWVNGATLPQIAETWFKTGDDDLTAALTNCGQNLFGKLTQSAAWGLGALLSIT
GCDLPEKQLNALSNLPSRVFYGVGSDDAVALRLLGVPRSAAPRLADSMGNIAIKPLAQVR
TRLRGLDQGAWQEALGQREGDVYRKVWRVLEGLD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcggttgctcgatctgattgccccgaccagagcggatgccttgcggcaggcc
agtcgggctcagatccatcgtgaactgctcgagcggtccctcgacgaagacacgcagctc
attgcacgagccgcggaagcgttggagcttgcggttctcgatttgctgtcggcagcagac
aacgacgatgagcaagcgcaacgggatctccggctgtgtgctgccgacgccttccgattg
ttacgggcgcttcctagaccgacagattcggtggaggcagcagcttttttgctgcgcggc
ggtgcgctcgccgtcttgggcgacaaaggcgcggacgccgcccgttggctcagcgaggag
ccgtggccggagcttgcgccggaaaccgccgattggcgtacccagacctggtcgaccatc
ttggacgtctggctccgtctgattcgcaagcggggatggacggatcgggatgcggtgctc
gaaggcgtggcccgactgcgtgacgcccagaccgaattcgagcagcagtatctcgaaggc
caagatcccgcaatggccaaggccgccgcgctggagctgatcggcctgtaccacctggcg
aaggccgcagagatccttgccctctacatcaccgacggcgtggtggacggcaagtaccag
atccaacagctgctggagacccacttcgaccgggtcctcacgatctgccagcacgctcag
atgcttgatctggaaccgctcagtcggctcctggctgcgtcagccgagcaaatggccgag
aactcgatctggactgtcacccgggccgtcaactctcgggtcacccagtttgttcgaacc
ctggttgatcgtgggcgaggcgaccgagccattttcgacgtgctgccgccccagcgccga
acgctcgcagagagggggttgcttggttccagcaggcgtgcggtcgtcgtcagcctgccc
acttcgagcggcaagaccctgattgcccagttccgcatcctccaagcactgaaccagttc
gagatggagcgcggctgggttgcctatctggccccgacccggaccctggtcaaccagatt
gcccggcgcctgcgcaaggagttcgagccgctcgacatcgtcgtagagcaagtcagcccc
gccatcgaggtcgacaacatcgaggccgagctactccggcagagcgacccctcggcggca
ttccgagtgctcgtcaccacgccggagaagctggacctgatgctccggcagggctgggag
gccgagatcgatcgtcccctgacgctcgtcgtcgtcgatgaggcccacaacctgagccat
ttcaatcgcggcctcaagctcgagctgctgctcgcgaccatcaacagcgagtgccaacgt
gcccagttcctgttgctcacccccttcatcagcaacgcgcgggaggttgcccgctggctc
ggcggggccaattccgaggacgtcagccttgccttggattggcagccgaatgatcgcgtc
atcggcatcgtcgaaccagagaaaggcgagcggatcaatggacgaagctataactacagc
ctgcgcatgaagactcaacacaccacgcgccagacattgaccgtagacgagctgctgcga
ttcccaaagtccgaccagatagcagccaccttcagcaaggtcagcgatcagggcacgctc
gccgccgtaaccgcgcaacagatgcagcgccggggtcctgtcatcgtcatgcaccaacgt
cccgattgggtctggtcattggcggacaagctccgcatcgacgccaacaggcgccaagca
atgagcgaacggatcgggctcgtccttgcgtttctggatctggagatggggacggacttt
cccctgcaggatctcctggcccacggcatcggcatccatcacgcgggactttctgaagat
gtgtgtgcactcatggagtggctattcgaggaggacgagctgagcttcctagtggccacc
acgaccatcgcacaaggcgtaaactttccggtgaccggcgtcgtactggcctcacatcag
tacccctatggaatggatatgccgcccgaggacttctggaacatcgcgggacgggctgga
cggatcgggcaaggctctctgggtgtcgtcgctttggttgcagccaatcaagcgaaagcg
gaccggctgcgcatcttcattaatcgccaaaccggcgatctcaactcggcgctgatcgcg
ctcgccactgatgccgccgaccagctcggcgatctcaggggaatcgtttacagccatccg
aaatggtctgccttcgtccagtatcttgcacacacctaccggcagatggggcagccagaa
gggtttgccgacgagatcgagcagattctgcgcggcaccttcggattcgatcgcttgcga
gcccagcatgttggccttgcgagccggctgttggacggggtgcatgcttactccgcctat
ctcggggagcccgggcagccgctgaaactagtcgacagcactggattttctctgcaaacc
gtcaaaacggttctgaaagccgcacgcgaatgtaatgtctccgccgattcctgggacaag
gacaggctgttcagcaaacaggacaacgagctccaaaacatgatgggcgtcctactgcgg
gttcccgagctgcgagagaacctgaaggcggcgactggagggggcgacggcgatggcgac
aagttggccatgattgtcaaggactgggttaatggagcgacactgccgcagatcgccgaa
acctggttcaagaccggagacgacgatctcaccgcggcgctgaccaactgcggacagaac
ctgttcggcaagctgacgcaatcggcagcctggggtttgggagccttgctctccatcact
ggctgcgacttgcccgagaagcagctgaatgcgctgagcaatcttccgtcacgagtgttc
tacggcgttggcagcgatgatgccgttgccttacgtctgcttggggttccgcgctctgcc
gccccccggctggcggacagtatgggcaacatcgccattaagccactagcacaggttcgc
acccggctacgcggcctggatcaaggtgcctggcaggaagctctcggccaacgcgaaggc
gatgtctaccgcaaggtttggcgtgtgttagagggattggattga
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