Thiohalocapsa sp. PB-PSB1: N838_24650
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Entry
N838_24650 CDS
T07019
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thip03009
]
N838_24650 (rlmH)
Enzymes [BR:
thip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
N838_24650 (rlmH)
Ribosome biogenesis [BR:
thip03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
N838_24650 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
QQO56067
LinkDB
All DBs
Position
complement(5880840..5881337)
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AA seq
165 aa
AA seq
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MRIRLLSVGRRMPRWIDEGFAEYAKRLPAQCALDLVEIEPGPDRGGRGRGKVSAVDLERI
RRAEGERLLKALPDTALPVALDMRGKPWSSEQLAHELQGWLASGRDLALLVGGPDGLSDE
CLARAEQHWSLSKLTFPHTLVRVILAEQLYRAWSITQGHPYHRGV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccgactgctgagcgtgggccggcgcatgccgcgctggatcgatgaagggttc
gcggaatacgccaagcggctgccggctcagtgcgcattggatctggtcgagatcgagccc
ggaccggatcgcggcgggcgcggacgcggcaaggtcagcgctgtcgatctcgaacgcatt
cgccgcgccgagggcgagcggctgttgaaggcattgccggacaccgcattgccggtggcg
ctggacatgcgcggcaagccctggtcaagcgaacagttggcgcatgaacttcagggctgg
ctggcaagcgggcgagacctggcgctgctggtcggcgggccggatggtttatcggatgaa
tgcctggcgcgtgctgagcaacactggtcattgtctaagctgacctttccgcacacgctg
gtgcgtgtcatcctggccgaacagctgtatcgggcttggagcatcacccaaggacatcct
taccatcgaggcgtgtaa
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integrated database retrieval system
