Thiohalocapsa sp. PB-PSB1: N838_24710
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Entry
N838_24710 CDS
T07019
Name
(GenBank) hypothetical protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Gene cluster
GFIT
Motif
Pfam:
FlgD_ig
BiPBP_C
PD40
Motif
Other DBs
NCBI-ProteinID:
QQO56078
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Position
complement(5894219..5898181)
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AA seq
1320 aa
AA seq
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MPALPLLPPLLLAVLLALPQATHAAQQFQGLCSLVKIEIIQELALERIGFLATLEVTNNE
GDASLTDFSAALTFQFRPPGETQYLDASDRFFVQPPEIQGINAVDGTGIIRPGETAQVSW
FIIPKIAAGGESADGLVYRVGAELGGALYGEPLPADVLAVIPDRIRVLPEPQLDITYFQP
RDVDGDDPFTPEIVEAPIPFTLGVLVRNQGFGPARNVRINSEQPRIVENEQGLLVVPRLL
GARVDDQPTDDTSLKVELGDIEPSRCRKGAWDMITSLSGEFTEFKASYTHASELGGRDTS
IITDLNAYFMVQEVLNDQPGRDDLLDFLAETQGGEELIPDALYESDCNVLPVNQLSQVEV
ASYAPASRTAVIDATADFENWVFLRVDDPAQAKYAIESVVRSDGKLLDPHNYWTHIRYRE
SDNAKLTWLNIFDFVALGEYSYTVTYAPPEDDNEPPVTRLRFVGEAQEQAGRYYILPDTQ
LFFTVEDASPVGTYLRLDDEVEFRPAYPFWIAQAGEHQLSFYSEDAAGNREAEQQVTLVV
VAAHPQLASLDASSEPLFVSGDALSIRPDRRAVNFQGLLYGSRLDARVDVYRGVYGAPTL
TGVPSTPTPQADATLTVGGVQVDHYRWRLNGGAWSEERDVAQPIELNGLAGLVVVDVLGR
SSHGDYPDPDQALSVGWQVADTPVWLTGNLEQPAATDTAVFDLVGSDTYCWRIDGSFYRP
ETQPGEPIELTGLAPGEHQVEVLPRANQSEACPADAPGASSLTWLIDRGYGYRLPAEQQV
RGEDLGQVDDIASSFHWDGRDDAGVPVPAGWYSVMVSLTDDLGRTGNGIVAVEVADLLAA
AAVLDDGDAPQARVRAAGHWAVWQDQRAGNWDILAQNLRDSAPALVIADGPLNQERPDTD
GRILVWQDRRPDGNWDIWWTDLTAGTANAALTATADLDETRPAVDWPWVVYQQRPSGDDN
APWQVIARHLLDGTSISVDPTTQDQLDPRLHRGRVVWQDFRDPGYGEIYLADLRNGDVRR
ITTDPGGQYHPDIADERIVWSDNRNTQLDLYGFDLRRGVEQRLTDSPQDETRPALNGPWV
VYADDAGGEQGIDLRLMHWAGGGLQLSNSGGVKQAPVLADGQVLWIDGSGAAMRVHAAPL
PDLQPVFNNNNAIVVTTGMADYLGDAHGLLSLWHEQAGVTAITRYTSLTPVPVTETVVWD
GAGPSGPNFPLNPGSFIWAAFGQARVLELGQGGCAALDLAAGSNALAYDCFPDDYGAYRL
IRELGPARIAAVRLLDAETGRWRSANVSAGAIVGDDFPIGRLAVVLIELINPVTNWIPGG
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcgctgcctctgctgccacctctgttactggccgttctgctggcattgccgcag
gccacccatgcggcgcagcagttccagggactttgctccctggtcaaaatcgagatcatc
caggagctggcgctggagcggatcggcttcctggccacattggaggtcaccaacaacgag
ggcgacgccagtctgacggatttttccgcagccctgaccttccaattccgcccccccggc
gagacccagtacctggacgcctcggaccgcttcttcgtccagccgccggagatccaaggc
atcaatgccgtcgacggcaccggcatcatccgccccggcgagaccgcgcaggtgagctgg
ttcatcatcccgaaaatcgccgccggcggcgagtcagcggacggactggtctaccgggtc
ggcgccgagctgggcggcgccctgtacggcgagccgttgccggcggacgtgctggcggtg
atcccggaccgcatcagggtgctgccggagccgcagctcgacatcacctacttccagccg
cgggacgtggacggcgacgaccccttcacgcccgagatcgtcgaggcgccgatcccgttc
accctcggcgtgctggtgcgcaatcagggcttcggtccggctcgcaacgtacgcatcaac
tccgagcagccgcgcatcgtcgagaacgagcagggactgttggtggtgccgcggctgttg
ggcgcgcgggtcgacgaccagcccacggacgacaccagcctgaaggtggaattgggcgat
atcgaaccctcgcgctgccgcaagggcgcctgggacatgatcaccagcctgtccggcgag
ttcaccgaattcaaggccagctacacccacgcctccgagctgggtgggcgcgacacctcg
atcatcaccgatctgaacgcctatttcatggtccaagaggtgctcaacgatcagcccggg
cgcgatgacctgctcgactttctggccgaaacccagggcggcgaagagctgatcccggat
gccctctacgaaagcgactgcaacgtattgccggtgaaccagctgtcgcaagtcgaggtc
gcctcctatgccccggccagccgcaccgccgtcatcgatgccacggcggatttcgagaac
tgggtcttcctgcgcgtggacgacccggcccaggccaagtatgcgatcgaatctgtcgta
cgctccgacggcaaattgctcgacccgcacaattactggacgcacatccgctaccgcgag
tccgacaatgccaagctgacctggctgaacatcttcgacttcgtcgccctgggcgagtac
agctacactgtcacctatgcgccgcccgaggacgacaatgagccgccggtgacccggctg
cgcttcgtcggcgaggcccaggaacaggccggacgctattacatcctgcccgatacccag
ctgtttttcaccgtcgaggacgcaagcccggtgggaacctatctgcgcctcgacgacgaa
gtcgagtttcgaccggcctacccgttctggatcgcacaggccggcgagcaccagctcagc
ttctattccgaggatgccgctggaaatcgcgaggccgagcagcaggtgacgctggtggtg
gtggccgcccatccgcagctggcgagtctggatgcctccagcgaaccgctgttcgtcagc
ggcgatgcgctgtcgatccggcccgatcggcgcgccgtcaacttccagggcctgctctac
ggcagccggctggacgcgcgggtggatgtctatcgcggcgtctatggcgcgccgaccctc
accggcgtgccctcgacgccgacgccccaggccgatgcgactctgacggtcggcggcgtt
caagtcgaccattaccgctggcgcctgaacggcggcgcttggagcgaggagcgcgacgtc
gcccagcccatcgagctgaacgggctggccggcctggtggtcgtcgacgtgctcgggcgc
agcagccatggcgactatcccgaccccgaccaggccctgtccgtcggctggcaggtggcc
gacaccccggtctggctgaccggcaacctggagcagcccgccgcgaccgacaccgcggtg
ttcgacctggtgggcagcgatacctactgctggcgcatcgacggcagcttctaccgtccc
gaaacccagcccggcgaacccatcgaactgaccggcctggcgcccggcgagcaccaggtc
gaggtgctgccgcgggccaaccagtccgaagcctgtcccgcggatgcgccgggcgcctcc
agcctgacctggctgatcgaccgcggctatggctatcggctgcccgccgaacagcaggtc
cgcggcgaggatctgggccaagtagacgacatcgccagcagcttccactgggacggtcgc
gacgatgccggcgtgccggtgcccgcgggctggtacagcgtcatggtcagcctgaccgac
gacctgggccgcaccggcaacggcatcgtcgcggtcgaggtggccgacctgctggccgcc
gcggcggtgctggacgatggcgatgcaccacaggcgcgggtgcgggcagccgggcactgg
gccgtctggcaggatcagcgcgccggcaactgggacatcctagcccagaacctgcgtgac
agtgccccggcattggtgatcgccgacgggccgctgaaccaggagcgtccggacaccgac
ggtcgcatcctggtctggcaggatcgtcggcccgacggcaattgggacatctggtggacc
gatctgacggccggcaccgccaacgccgcattgaccgcaacagcggacctggacgagacc
cgcccagccgtcgactggccctgggtggtttaccagcagcgcccgagcggagacgacaac
gcgccctggcaggtgatcgcccggcatctgctcgacggcacaagcatcagcgtcgatccg
accacccaagaccagctcgacccgcgcctgcaccgcggccgcgtggtctggcaggatttc
cgcgatccaggctacggcgagatctacctggccgacctgcgcaacggcgacgtgcgccgc
atcaccaccgaccccggcggccaatatcatccggacatcgccgatgaacgcatcgtctgg
tccgacaaccgcaacacccagctcgacctgtacggcttcgatctgcgccgcggcgtcgag
caacggctcaccgacagtccgcaggacgagacccggccggcactgaacggtccctgggtg
gtctatgccgacgacgccggcggcgagcagggcatcgatctgcggctgatgcactgggcc
ggcggcggtctgcagcttagcaacagcggcggcgtcaagcaggcaccggtactggccgac
gggcaggtactctggatcgacggcagcggtgccgcgatgcgcgtccatgccgccccgctg
ccggatctgcagccggtgttcaacaacaacaacgccattgtcgtcaccaccggcatggcc
gactacctgggcgacgcccatggcctgctgagcctatggcacgaacaggccggcgtaacc
gccattacgcgttacaccagcctgactccagtgccggtgaccgaaaccgttgtctgggat
ggtgctggtcccagcggcccgaacttcccgctcaacccggggagcttcatctgggccgcc
tttggtcaggcgagggtactggagctgggccagggcggctgcgcggcgctggacctggct
gccggcagcaatgcgctcgcctacgactgcttccccgacgactatggcgcctaccggctg
atacgcgagctcgggccggccaggattgccgcggtgcggctgctcgatgcggagaccggc
cgctggcgcagcgccaacgtatccgccggcgccatcgtcggcgacgacttcccgatcggc
cggctcgcggtggtgctgatcgagctgatcaaccccgtgacaaactggataccgggaggc
tga
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