Thiohalocapsa sp. PB-PSB1: N838_25685
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Entry
N838_25685 CDS
T07019
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00020
Citrate cycle (TCA cycle)
thip00190
Oxidative phosphorylation
thip00650
Butanoate metabolism
thip01100
Metabolic pathways
thip01110
Biosynthesis of secondary metabolites
thip01120
Microbial metabolism in diverse environments
thip01200
Carbon metabolism
Module
thip_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thip_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thip_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N838_25685 (sdhA)
00650 Butanoate metabolism
N838_25685 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
N838_25685 (sdhA)
Enzymes [BR:
thip01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
N838_25685 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
QQO56250
LinkDB
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Position
complement(6173332..6175023)
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AA seq
563 aa
AA seq
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MLTYDILIVGSGGAGLYAALESRLQEKLQVAVLTKVYPTRSHTGAAQGGVNAALGNYDPT
DSWEQHWFDTVKGSDYLADQDAAEMMCREAPTVVREMEHWGAPFYRTDEGKIAQRPFGGA
SKPRACYAADKVGHIMLHTLYEQGLRHGVDYFNEWFALNLVHDGQRCIGINAFSIRTGRI
YTIQAKAVILATGGHGRTYWTRTSNAYGNTGDGSAIAYRAGLPLKDMEFIQFHPTGLRRS
GILVTEGARGEGGYLLNGEGERFMQRYAPDKMELGPRDLVSRAIETEVREGRGGPDDEVF
LDITHLGPERIQERLPQIRQLCIEFEGMDPFEEPIPIKPTAHYSMGGVHTDINGLTSIDG
VYAAGESGCVSVHGANRLGGNSLLDILVFGRRAGQHAMQYASSVEFAEVPDSALTEAETC
IKELMEGDGKETVASIRQDLGRVMADKAGIYRDGKGLAEAVNDIEELQHRYKRLAVKDRN
TVFNTDMLAALELRNMLALAELIALGALQRTESRGAHSREDYPERDDQNWLKHTMATLGA
DGRPNISYESVAITKFKPEARTY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctacgacatcctgattgtcggctccggcggcgcggggctttatgccgcgctg
gaatcccgcctgcaagaaaaattacaagtggcggtcttgaccaaagtctacccgacccgc
tcccacacgggcgcagcccaaggcggcgttaacgcggcgctcggcaactatgatccgacc
gacagctgggagcagcactggttcgacacggtcaagggttccgactacttagcagatcag
gatgcggccgagatgatgtgccgcgaggcaccgaccgtcgtgcgtgaaatggagcattgg
ggagcgcctttttatcgaaccgatgagggcaagatcgcccagcgcccgttcggcggcgca
tccaaaccgcgcgcctgttatgccgctgacaaagtcggccacatcatgctgcacactctc
tacgagcaaggtctgcgccatggcgtcgactatttcaacgaatggtttgcgctgaacttg
gtgcatgacggacagcgttgcattggtatcaacgccttcagcatccgcaccgggcgcatc
tacaccatccaggccaaggcggtcatcctcgccaccggcgggcatggtcgcacctattgg
acacgtacatccaatgcatacggcaacaccggcgacggatcagcgattgcctatcgcgcc
ggattacctttgaaagacatggaattcatccaattccacccgaccggattgcggcgcagc
ggcattctggtcaccgagggtgcaaggggcgagggcggctatctgctcaatggcgaagga
gaacgcttcatgcagcgctatgccccggataaaatggaactcggaccgcgcgatttggtc
tcccgtgccatcgaaaccgaggttcgagaaggccgcggcggcccggatgacgaagtcttt
ttggatatcacccatctcggccccgagcgtatccaggagcgtttgccgcagattcgccag
ctctgtatcgaattcgaaggcatggatccgttcgaagaaccgattccgatcaagccaacc
gcgcattactcgatgggcggcgtgcacaccgatatcaatggcctgacttccattgacggc
gtttatgccgcaggcgaaagcggttgcgtctcggtacatggagcgaaccgcctaggcggc
aattcattgctcgatatcctggtattcggccgccgtgccggtcaacatgcgatgcaatac
gcaagcagtgttgaatttgccgaggttcccgattcggcactaaccgaggccgagacctgc
atcaaagaactgatggaaggcgatggcaaagagaccgtggcgagcatccgtcaggatcta
ggacgggtcatggccgataaggcgggtatttatcgtgacggcaaaggactcgcagaagcc
gttaatgacattgaagaattacagcatcgctacaagcgcttggcggtcaaggatcgcaac
acggtcttcaataccgacatgcttgccgcgctcgaactgcgcaacatgctggcattagca
gagctgatcgccctgggagccttgcagcgcaccgaatcccgcggagcccactcgcgggaa
gattatcccgaacgtgacgatcaaaactggctgaagcatacgatggcaaccctgggtgcg
gacggccgccccaacatcagctacgaatccgtcgctatcaccaagttcaagcctgaggcg
agaacctattaa
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