Thiohalocapsa sp. PB-PSB1: N838_26005
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Entry
N838_26005 CDS
T07019
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00061
Fatty acid biosynthesis
thip00071
Fatty acid degradation
thip01100
Metabolic pathways
thip01212
Fatty acid metabolism
thip02024
Quorum sensing
thip04146
Peroxisome
Module
thip_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N838_26005
00071 Fatty acid degradation
N838_26005
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N838_26005
09145 Cellular community - prokaryotes
02024 Quorum sensing
N838_26005
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thip01004
]
N838_26005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thip04147
]
N838_26005
Enzymes [BR:
thip01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N838_26005
Lipid biosynthesis proteins [BR:
thip01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N838_26005
Exosome [BR:
thip04147
]
Exosomal proteins
Exosomal proteins of breast milk
N838_26005
Exosomal proteins of breast cancer cells
N838_26005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQO58087
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Position
6238063..6239883
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AA seq
606 aa
AA seq
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MADWSEDLIPAERAQTLDGLFHQRVARSPDRIAYRWYARATNSWQAMTWRETAAQVARWR
SALDAEGLVAGDRVAILLRNCPEWIVIDQAALSLGLVTVPLYTDDRADNAAYILNDAEVK
LLVIQDARRFQRLAQALDNQPWPLRAVLMEQTDTAMRARAADPRLVAAVDWLPASGSEWD
QHQADPHALATIVYTSGTTGRPKGVMLSHRNILSNVDGALKIFKVFAQDEFLSFLPLSHM
LERTGSYYLPMMAGASVAYARSVTQLGEDLQHIRPTLMIAVPRVFERVHARIRTQLSTRP
ALLRRLFALATEVGWMRFEHRQGRRDWHPLLLLWPLLRRLFARPVLSKLGGRLRAAVSGG
APLPFGVARVFIGLDVPILQGYGLTETSPVISVNPIQDNRPRSVGVLLPGIQARIGEEDE
LQVKGPGNMLGYWKNPAATADILDADGWLRTGDQARIDGRHLHIIGRIKDVLVLSNGEKV
PPTDMELALGLDPLFEQVLIIGEGHSYLTALLVLNSDLWLEVAREHGLDPAQPASLQDAS
LIKYVQQRIRQVLVDFPGYAKIRRVTITLEPWSVENGLMTPTMKIKRSQVINRYQSEILE
MYELDS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttggcagactggtcggaagatctgatccccgccgagcgtgcgcaaacgctcgacggcctg
ttccatcaacgcgtagcgcgctcgcctgatcgcatcgcttaccgctggtacgcccgtgct
accaacagctggcaggctatgacctggcgcgagacggccgcccaggtggcgcgttggcgt
agtgcgctggatgccgagggcttagtggccggcgatcgcgttgcaatcctgttacgcaat
tgtccggaatggatcgttatcgaccaggcagcattatcgcttgggctggtaacggtgccg
ttgtacaccgatgaccgcgccgacaacgctgcgtatattctcaatgatgctgaagtcaag
ctgttggtgattcaagatgccaggcgcttccagcgcctggcgcaagcgcttgacaatcag
ccctggccattgcgcgcggtgctaatggaacaaaccgacacagcgatgcgcgcacgtgct
gcggacccgcggctggtcgctgccgttgactggttgcccgcatccggctcggaatgggat
cagcaccaagcagatccgcatgcgctggccaccattgtttatacgtccggcaccaccggc
cgacccaagggcgtcatgttgagccatcgcaatattctcagcaatgtcgatggagcactg
aagatcttcaaggtattcgcgcaggacgagttcctatcctttctgccgctgtcgcatatg
ctggagcgtaccggcagctattatctgccaatgatggccggtgccagtgtcgcctatgcg
cgttcggtgacgcagttgggcgaagacctgcaacacatccgtccaactctgatgatcgcg
gtgccacgcgtattcgagcgcgttcatgcccgcatccgcacacagttgagtacgcgtcct
gctctgctgcgtcgattgttcgcgctggcgacagaggtcggttggatgcgattcgaacac
cgtcagggccgccgggactggcatcccttactgttactgtggccattgctgcggcgcctg
tttgcgcgtccggtgctgagcaaactaggtggtcgcttgcgcgctgccgtcagcggtggg
gcgccattgccgtttggcgtggcgcgagtcttcattgggctcgatgtgccgatcttacag
ggttacggtctcaccgagaccagcccggtcatctccgttaacccgattcaggataatcgt
ccacgtagcgtcggcgtgctgttgcctggaatacaggcacgtattggcgaggaagacgaa
ttacaggtcaagggtcccggcaacatgctcggttattggaagaatccggcagccacggcc
gatatactcgatgccgatggttggttgcgtaccggtgatcaggctcgtattgatggtcgg
catctgcatatcatcggccgtatcaaggacgttctggtgctgtccaatggcgaaaaagta
ccgccaacggacatggaattggccctcgggctggatccgctgttcgagcaggtattgatt
atcggcgagggccattcttacctgaccgcgctgctggtgttgaacagcgatctgtggctc
gaggtggcgcgcgagcatgggctagatcccgcgcagcctgcgagcctgcaggatgcgagc
ttaatcaaatatgtgcaacagcgcatccgccaggtattggtggattttcccggttatgcc
aaaatccgacgcgtgacgatcaccttggagccttggtcggtcgaaaacggtttgatgacg
ccgaccatgaagatcaaacgcagccaagtgatcaatcgttaccagtctgaaatcctcgag
atgtatgagttggattcctga
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