Thiohalocapsa sp. PB-PSB1: N838_26910
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Entry
N838_26910 CDS
T07019
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
DUF6443
Motif
Other DBs
NCBI-ProteinID:
QQO56452
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All DBs
Position
complement(6430294..6435480)
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AA seq
1728 aa
AA seq
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MCVPVFSVGSNSLDLSLFYNSDNADGSRGYIDARLGYGWTHSHNQLLFTQRGHMFLLDGR
GQVTRYQRTGRTTYSAGKGEFQTLERNLDGSFTLIDKDESRRHFEAIPGDTLRVSGRVFR
LVRSEARNDRVTEYDYDGSGRLTDIRDASFGYHITLTHRADGQVASITDALTGRTLQLHY
DSTGRKLLEITEPPAQPGQQPKTWRFSYNVDYQITAVTDRNGERFTVGYRNDKPVSIKAG
NENLLTYSNPTNWAIDELAVAREQMRELIPSTTTQRDANGNTWQVEYDINGFVTKSVAPD
GATSHTTYDDATLLPETETDANGNTTSYEYDGLGNLTKETDAKGFFTTFEYGVRDPAVTD
PDDPGYLVCRDQLSKATYPNGSVTVYEYDISRDANGLHRCNRIKETRDDGGLNLISAWEY
DDRGLMTLERDPNGHETTHDYDTAGNRIKTTDAEANATRYAYDDAANRTCMVDGNGHVTV
YEYDALDRLIRETAKIGTVIDPTDPIGPACTPADADDIITAEYEYDGNDNQTLVRRQSNT
SEPREWQVTTYEYDDRHRLVKETQDPGGLDLMTTYAYDGNDNRIATTDPRGLTTTFEYDD
QNRLTKVTDALIYETGYSYDPVGNRIEEIDANGHRTCSQYDELNRLTVQIRKMGPTSCAL
AASDDLVTRHFYDSGADISCDHDPGSPQCDGPMPGGSNIASMIDPEGKVTYYKYDKLDRR
WITIRKVGDTADACDPAGDPNEQDWCEYTKYDPADNVVARIDANDNRTDMVYYDNDWLLS
ETQDPGGLDLVTSYTYDGAGNVATVTTPRGNVIYNTYDERDQLVKVEDIVSDPLPPYDLV
AAYAYDGIGNRVEECDGNLNCTGYSYDAVNRLIDIVDPMGETALNDYDPNGNLTKVTDRE
GHVTCHYYDAINRRTRTAELMGGTNCALLSFQDIWTDTEYDGVGNVTRLITARLNSTPGA
CKGATPPDDCQITAYDYDEADRLVLETYADETTREFSYDKAGNLTDRIDQLGEVTLYAYN
DLYYLMLRDYQDPAEPDDSFEYDIGGRMTVATKDYPAADPRPDWVVTFDDYDAVNRLLQT
TQDATGVPMVVGYSYDTPNGLRDLVYPGGRYCLEQHDLRERLVDVTCDSFDAQYAYDLGN
RVETRDYTNGVTATYTYNANDWITDLVHALGATEIVDFHYDYDREGNKRYEEKSPAFLAG
QSEAYAYDDIYRLIEYKVGNLVGSDVPVPITQRQYDLDKVGNWDQFTVDDDVAGPGVPVD
YNNTPNVMNEYDEDGPEDGIPDDFKDDKATPVADGEDWGHDDNGNRIYDGKRSYVYDHEN
RLIGVTYEAPAGDLVSEYRYDALGRRVFKQTDITAAYGPTTVTRYAYDDARAIEEQDAPG
NTLATYVYGNYIDEVLSMQRGGADFYYHQNALWSVAAVTDAAGNPVERYAYTDYGCPTIT
DGAGGAVAPNAWGTAHSAIGNPYMFTGRRWDEESGLYYYRARHYDCESGRFLQMDPEHYA
DGPNMYEFVVGNPANRLDPLGTVVQIPFPPEVGRFVGLLGTLCPAGKWAYVGRRLVSGVS
NFCKGRVVKTPCDGTFRAFRWCTRAKHPISCCCICDAINDRETVQLISSRSPGGYWRRKR
GRTTPYFVVVGTARPGYAGHSDPALPNTGLARATPAIILAHELCCHHVPRMGHPRNRFRR
YNERDPVIRCENRIRAEHGWGHRVGSSEVPVARATANARARARARGWL
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgccggttttcagcgtcggcagcaactcgctggacctgtcgctcttctacaac
agcgacaacgccgatggctcgcgcggctacatcgatgcacgtctcggctacggctggacg
cactcccacaatcagctcctcttcacccagcgggggcacatgttcctgctcgacggacgc
ggccaggtcacccgctatcagcgcaccgggcgcaccacctacagcgccggcaaaggcgaa
ttccagaccttggagcgcaacctggacggcagcttcacgctgatcgataaggacgagagc
cgccgccacttcgaggccatcccgggggatacattgcgcgtgtcgggtcgcgtctttcgc
ctcgtccgttccgaggcacgcaatgaccgcgtcaccgaatacgactacgacggcagcggc
cggctgaccgacattcgcgacgcaagcttcggctatcacatcaccctcacccatcgcgct
gacggtcaggtggcgtcaatcaccgacgccctcaccggacgcacgctacagctccattac
gatagcacaggccgcaaattgctcgagatcaccgagccgccggcccagccgggccagcag
ccgaagacctggcggttctcctacaacgtggactaccagatcacggccgtcaccgatcgc
aacggcgagcgcttcacggttggttaccgcaacgacaagcccgtcagcatcaaggcgggc
aacgaaaacctactgacctatagcaacccgacgaactgggccatcgacgagctagcggtc
gcgcgcgaacagatgcgcgagctcatccccagcaccacgacacagcgcgatgccaacggc
aacacatggcaggtcgagtacgatatcaacggcttcgtcaccaagtccgttgcaccggac
ggcgcaacctcgcacacgacctacgacgacgccacactgctgccggagaccgagaccgac
gccaacggtaacaccaccagctacgagtacgacggcctcggcaatctcaccaaagagacc
gacgccaagggcttcttcacgacctttgaatacggcgttcgcgacccggccgtcaccgat
cccgatgatcccggctatctcgtctgtcgcgaccagttgagcaaagcgacctatccgaat
ggatcggtcaccgtctacgagtacgacatcagccgagacgccaacggcctgcaccgctgc
aaccgtatcaaagagacccgcgatgacggcggtctgaacctgattagcgcatgggaatac
gacgaccgcggcctgatgaccctggagcgcgaccccaacggccacgagaccacccacgac
tacgacacggccggcaatcggatcaagaccaccgacgccgaggccaacgccacccgctat
gcctatgacgacgccgccaaccgcacctgcatggtcgacggcaacggccatgtcaccgtc
tatgagtatgacgcgctggaccgcctgatccgcgagaccgcgaagatcggcaccgtcatc
gacccgaccgacccgatcggccctgcctgcaccccggccgacgccgatgacatcatcacc
gccgagtacgagtacgacggcaacgacaaccagaccctggtccgtcgccagtccaacacc
agcgagccgcgcgagtggcaggtcacgacctatgaatacgatgatcgccaccgtctggtc
aaggagacccaggaccccggcggcctggacctgatgaccacctatgcctacgatggcaac
gacaaccgcattgccaccacggacccgcgcggccttaccacgaccttcgagtacgacgac
cagaaccgcctgaccaaggtcaccgatgccctgatctacgagaccggctacagctacgac
ccggtgggcaaccgcatcgaagagatcgacgccaacggccaccgcacctgctcccagtac
gacgagctgaatcgcctgacggtccagatccgcaagatgggtccgacctcctgcgcattg
gccgcgtccgacgacctcgtcacccggcacttctatgacagcggtgctgacatttcctgc
gatcacgaccccggctcgccccaatgcgacggcccgatgcccggcggaagcaacatcgcc
tcaatgatcgaccccgagggcaaggtcacctactacaagtacgacaagctcgatcggcgc
tggatcaccatccgcaaggtcggcgacaccgcggacgcctgtgacccggccggcgatccc
aacgagcaggactggtgcgagtacaccaagtacgacccggccgacaacgtcgtcgcccgc
atcgacgccaacgacaaccgcaccgacatggtgtactacgacaacgactggctgctgagc
gagacccaggacccgggcgggctcgatctggtcaccagctacacctacgacggcgccggc
aatgtcgccaccgtcaccaccccgcgcggcaatgtcatctacaacacctacgacgagcgt
gaccagctcgtgaaggtcgaggacatcgtcagcgatccgcttccaccctacgacctcgtg
gccgcctatgcctacgacggcatcggcaaccgcgtcgaggagtgcgacggtaacctgaac
tgcaccggctacagctacgacgccgtcaaccggctgatcgacatcgtcgacccgatgggc
gagaccgccctcaacgactacgacccgaacggcaacctgaccaaggtcaccgaccgcgag
ggccatgtcacctgccactactacgacgccatcaaccgccgcacccgcaccgccgagctg
atgggcggaaccaactgcgccctgctgtcgttccaggacatctggaccgacaccgagtac
gacggcgtcggtaacgtcacccgcctgatcacggcccggctgaacagcacgcccggcgcc
tgcaagggcgccacgccgccggacgactgccagatcaccgcctacgactacgacgaggcc
gaccggctggtgctggagacctatgcggacgagacgacgcgggagttctcctacgacaag
gccggcaatctgaccgaccggatcgaccagctcggggaggtcacgctgtacgcctacaac
gacctctactacctgatgctgcgggactatcaggacccggccgagccggacgacagcttc
gagtacgacatcggggggcggatgaccgtcgccaccaaggactatcccgcggccgatccg
cgaccggattgggtcgtcaccttcgacgactacgacgccgtcaaccggctgttgcagacg
acgcaggacgccaccggcgtcccgatggtcgtcgggtacagctacgacacccccaacggc
ctgcgcgacctggtctacccgggcggccgctactgcctggagcagcatgacctgcgcgag
cggctggtcgatgtcacctgcgacagcttcgacgcccagtacgcctacgacctcggcaac
cgcgtcgagacccgcgactacaccaacggcgtcacggcgacctacacctacaacgccaac
gactggatcaccgatctggtccatgccttgggagccaccgaaatcgtggacttccactac
gactatgacagggaaggcaacaagcgctacgaggagaagagcccggcgttcctggcgggg
cagtccgaggcctatgcctacgacgacatctaccggctgatcgagtacaaggttggcaat
ctcgtcggctccgatgtgccggtgccgatcacgcagcggcagtacgacctcgataaggtg
gggaactgggatcagttcaccgttgatgatgatgtggctgggcccggcgtgcctgtcgac
tacaacaacacgcccaacgtcatgaacgagtacgacgaggatgggccggaagacggcatt
cccgacgacttcaaggacgacaaggcgacgcctgtcgccgatggcgaggactgggggcat
gacgacaacggcaaccggatctatgacggcaagcggagctatgtctacgaccacgagaat
cggctgattggcgtcacctatgaggcgccggcgggagacctggtcagcgagtaccgctac
gacgccctgggtcggcgtgtcttcaagcagacggatatcaccgccgcttacggtccgacg
accgtgacccgctatgcctacgacgatgcccgcgccatcgaggagcaggatgcgcccggc
aacacgttggcgacctatgtctacggcaactacatcgacgaagtgctgagtatgcagcgc
ggtggtgccgatttctactaccaccagaatgcgctttggtcggtggcggcggtgaccgat
gctgccggcaatccggtggagcggtatgcctatacggattatgggtgtccgacgataacc
gatggggctggtggggctgtagcgccgaatgcctggggaacggcgcatagtgcgattgga
aatccctatatgttcaccgggagacggtgggatgaagagtcggggttgtattattaccgg
gcgcggcattatgattgtgagagcgggaggttcttacaaatggatccggaacactacgcg
gatggacccaatatgtacgagtttgtcgtcggtaaccctgcgaatagactcgatccactt
ggaaccgtagtccaaattccattccctccagaagttggaagatttgtggggctgctgggg
acattgtgtcctgccggaaaatgggcatacgtcggacgacgtttagtttctggcgttagc
aatttctgcaaaggtcgtgtagtcaagacgccctgtgacggtacttttcgagcctttagg
tggtgcacaagagcgaagcacccgatttcgtgctgctgtatctgtgacgcaataaacgat
cgggagaccgttcagctcatttcatcacgatcacccggaggctattggcggcgcaaaaga
gggcgtacaacgccttacttcgttgtcgtcggaactgcgcggccagggtatgctggccat
agcgaccccgcactcccaaacacaggcttggcacgagccacaccagcgataattcttgca
cacgagttatgctgtcatcatgtaccgcgcatgggccacccaaggaatcgttttcgccga
tacaatgagcgagatccagtcattcgttgcgagaatcggatccgtgctgagcacggttgg
gggcatagagtgggaagttccgaagttccggtcgcaagagctacggcaaatgcacgagca
cgtgcacgggcgagaggttggctatag
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