Thiohalocapsa sp. PB-PSB1: N838_27795
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Entry
N838_27795 CDS
T07019
Name
(GenBank) mechanosensitive ion channel
KO
K16052
MscS family membrane protein
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_27795
Transporters [BR:
thip02000
]
Other transporters
Pores ion channels [TC:
1
]
N838_27795
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Msl2-3_C
Motif
Other DBs
NCBI-ProteinID:
QQO56603
LinkDB
All DBs
Position
complement(6629692..6632079)
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AA seq
795 aa
AA seq
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MAADSAATGLLQSEATASPRDTLRSFLATVDEVAEQKRLGDFDESEYHLLRQAIAMLDFS
ATPDGDDWAVRMLRVALLHEVLGRTELPAAADIPNAQAVAADDITEWGLPGTRIRLERVM
TGPRAGEFLFAADTVAVLDRLYRRAKAQPYRADATPGVYEQVVSLTDADGVYERLIRVHQ
RLEPVDTTSPRTTLDGFLANLNQAYALVMEANAALAASPPTMSKAEARALERKASGLLHR
AVDAVDLRRVPAALREEVGEVAALMLKEVLDRMILPPLDAVPNEQAVAAARDGVLGSFLR
SDGPLRWRLPNTEIEIVEINDGDRQGEFLFSAVTVADIHQAYDAVRDLPYRKEAFSGTEL
DYRSPAVSPGFYEYFVSTPGHLVPRASFSGELIDRLPDWLKTLHGGQTLWQWAALMLTVP
AVVSIVTVLVGVTRRLARRIGAPADGFVRMLAPIAGALLVSAGVEFLSGSVHLTGDVLTA
VTIIGDALVVAFVVWAVFGLSRAIAESVIASPRTRIKEDSIDATMWRIGSRILGFLLSVA
VLIHGLQVLGADVVPLLAGLGVGGLAVALAAQETLTDIFGALMILADRPYRIGHWVVIGE
YEGTVQSIGIRSTRIRTFYDSVLTIPNSKAVTSVVDNMGMREYRRIKTNIGIRYDTPPER
VEAFLEGIKRIIQTNPTTRKDYFHVVLNDFGPDYLRILLYCFVEVPDWSAELVERQRILL
EIIRLAAALDVQFAFPTQTLEIETFPGQPEPPPPAAGSPDELRAVAAGFGSAEKAARPRG
LGIFVPPHEEGHKLS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgactcagccgccacgggcctgttgcaatccgaggcgaccgcaagcccgcgg
gatacgctgcgcagcttcctggccactgtggacgaagtagccgaacagaaacgccttgga
gacttcgatgagtccgagtaccacctgctgcgccaggccattgcgatgctggacttcagt
gcgacgccggacggcgatgactgggcggtgcgcatgttgcgggttgcactgctgcacgag
gtgctggggcgcaccgagctgccggcggcggcggacatcccgaatgcacaggccgtggcc
gccgatgacatcaccgaatggggtctgcccggcacccgcatccgcttggagcgcgtgatg
accggcccgcgcgccggcgagttcctgttcgccgccgacaccgtcgccgtactagaccgg
ctctaccggcgcgccaaggcgcagccctatcgcgccgacgccacccccggcgtctacgag
caggtcgtctcgctgacagatgccgacggcgtctacgagcgcctgattcgcgtgcaccag
cgcctggagccggtggacaccaccagcccgcgcaccacgctggacggcttcctggccaac
ctcaaccaggcgtatgcgctggtgatggaggccaacgccgcgctcgccgcgtcgccccct
accatgagtaaggccgaggcgcgcgcgctggagcgcaaggcctcgggcctgctgcaccgg
gcggtggacgcagtggatctcaggcgggtacccgcggcgctgcgcgaagaggtcggcgag
gtggcggcgttgatgctgaaggaggtgctcgaccgcatgatcctgccgccactggatgcg
gtgccgaacgagcaggcggtggctgcggctcgcgacggcgtgctcgggtccttcctgcgg
agcgacgggccgctgcgctggcgtctcccgaacaccgagatcgagatcgtcgagatcaac
gacggcgaccggcaaggggagttcctgttcagcgccgtcaccgtggcggacatccaccag
gcctacgatgcggtgcgggatctgccgtaccgtaaggaggccttttccggtaccgagttg
gattaccgctcgccggccgtgtcccccggcttctacgaatacttcgtctccactccgggg
catctggtgccgcgggccagcttctccggcgagctcatcgaccgcctgccggactggctg
aagaccctgcacggcgggcagaccctgtggcagtgggcggccctgatgctgaccgtgccc
gccgtggtgtcgatcgtgaccgtgctggtgggggtgacgcggcgcttggcgaggcgcatt
ggagcgcctgccgacggcttcgtgcgcatgctcgcgcccatcgccggggcgttgctggtg
agcgccggagtcgagtttctgtcggggtcggttcatctcaccggcgacgtgctgaccgcc
gtgaccatcattggcgacgccctagtggtggcgttcgtggtctgggccgtattcgggctg
agtcgggccattgcggagtcggtgatcgcctcgccacgcacccgcattaaagaggacagc
atcgacgccaccatgtggcgcatcggctcgcgcatactgggcttcctgctcagcgtcgcg
gtgctgattcacggcctgcaggtcctcggcgccgacgtggtgccgctgctggcgggcctc
ggggtcggtggcctggcggtggccctggcggcgcaggagaccctcacggacatcttcggc
gcactaatgatcctcgcggaccgcccctaccgcatcggccactgggtggtcatcggcgag
tacgagggcacggtgcagagcatcggcatccgcagcacccgcatccgcaccttctacgac
tccgtgctcaccatcccgaactccaaggcggtcaccagcgtggtggacaacatgggcatg
cgcgaataccggcgcatcaaaaccaacatcggcatccgctacgacacgccgccggagcgg
gtcgaggcctttctggagggcatcaagcggatcatccaaaccaacccgaccacccgcaag
gactacttccacgtcgtgctgaacgactttggcccggactacctgcgcatcctgctgtat
tgctttgtcgaggtgccggactggtccgccgaactggtcgagcgccagcgtatcctgctg
gagatcatacgcctcgccgctgcgctcgacgtgcagttcgcgttcccgacccagaccctg
gagatcgaaaccttccccggccagccggagcctccgccacccgcagcaggtagcccggac
gagctccgcgctgtcgccgccggtttcggcagcgccgagaaggccgcaagaccccgaggg
cttggcatcttcgtgccgccgcatgaggaggggcacaagctgagctga
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