Thiohalocapsa sp. PB-PSB1: N838_29305
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Entry
N838_29305 CDS
T07019
Name
(GenBank) hypothetical protein
KO
K07267
porin
Organism
thip
Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_29305
Transporters [BR:
thip02000
]
Other transporters
Pores ion channels [TC:
1
]
N838_29305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
QQO56853
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All DBs
Position
6949121..6950506
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AA seq
461 aa
AA seq
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MSQQITVFCVGLAFALAGLGASGQAGADDAAADKASDKNGTPASRPGIVPIPNYGGGLGE
RAYLLGDFGGRRTEWANNGFQFDVDTVSWADSVVDGGQSGATRFGANLTYNFTIDLMRAG
IVPGAMIQVRAESLVGDKSASANTGQLTPANTASLSPTNYNVLGAGYDLALSQLSWLQMF
SERFGVIFGKLDLYGDGAPSEFAGGRGRTQFMNWSLNYPTPALYVPSSTLGAGVVVLPNR
DLSITSLLLSGTQCANSDCFEDLDDKGGIWATNASYQYRLRGLPGGVNGSFTYFFDKDFT
ELGSVTFVSTEGLKTSTKRESWIVGGSFWQYLSVKGTHEGPVNLTNKVPDLQGWGIFGSL
TFADNRTNPWKTSLNLGVGGRGIISKRPNDLYGMGYFYNDLEKTLIEETANFDDHGQGVE
AFYNLAITNAIRLSANVQYLSSVDRDIDDSLYVAGRLQVLF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagatcacagtattctgcgttgggttggcgtttgccttggcggggcttggg
gcctccggtcaagccggggccgacgatgccgcggcggacaaggcctcggacaagaacggt
accccggcgtcccgccccggcatcgtgccgataccgaactacggcggcggtctcggcgaa
cgggcctatctcctgggcgacttcggcggcaggcgaaccgagtgggccaacaacggcttt
cagttcgatgtagacacggtgagctgggccgactccgtcgtcgatggcgggcagtccggc
gccacccgcttcggcgccaacctcacctacaacttcaccatcgatctgatgcgcgccggc
attgtgcccggggccatgatccaggtccgtgcggagtcgctggtgggtgacaagagcgcc
agtgccaacacgggccaactgacgccggcgaacaccgcatccctgtccccgaccaactac
aacgtgctcggcgcgggctatgacctggcgctgtcgcaactctcctggctacagatgttc
agcgagcgcttcggcgtcatcttcggcaagctcgacctctacggcgacggagcgccgagt
gagttcgccggcgggcgcggccgcacccagttcatgaactggagcctgaactacccaaca
ccggcgctgtacgtgccctcatccaccctcggcgccggcgtcgtggtgctccccaaccgc
gatctgagcatcacgagcctgctgctcagtggcacccagtgcgcgaacagcgactgtttc
gaggacctggatgacaaggggggcatctgggcgaccaacgcgagctatcagtaccggctc
cgaggcctgcccggcggcgtgaacggttccttcacgtatttcttcgacaaggacttcacc
gagctcggctccgtcaccttcgtgtcgacagaagggctgaagacatccacaaagcgcgag
tcttggatcgtcggcggctccttctggcagtacctgtcggtcaaggggacccacgaggga
ccggtcaacctcaccaacaaggttcccgacctccagggttgggggatcttcggcagcctc
accttcgcggacaacagaaccaacccgtggaagacaagcctcaacctcggcgtcggcggg
cgcggcatcatctccaagcgaccgaatgacctgtacgggatgggctacttctacaacgac
ttggaaaagaccctgatcgaagagacggccaacttcgacgatcatggtcagggggtcgag
gccttctacaacctggcgatcaccaacgccatccgactctccgccaacgtgcaatacctc
tcctcggtcgatcgcgacatcgatgactcgctctatgtcgccgggcgcctccaagtcttg
ttctag
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