Thiohalocapsa sp. PB-PSB1: N838_32700
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Entry
N838_32700 CDS
T07019
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
N838_32700 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thip01007
]
N838_32700 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thip03016
]
N838_32700 (serS)
Enzymes [BR:
thip01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
N838_32700 (serS)
Amino acid related enzymes [BR:
thip01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
N838_32700 (serS)
Transfer RNA biogenesis [BR:
thip03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
N838_32700 (serS)
Prokaryotic type
N838_32700 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CC_Bre1
NOCA1_mid
Cep57_CLD_2
DUF8221
Mis12
Astrin_C
BAR_4
LEKR1
PCRF
Motif
Other DBs
NCBI-ProteinID:
QQO57407
LinkDB
All DBs
Position
complement(7759203..7760513)
Genome browser
AA seq
436 aa
AA seq
DB search
MLDPKLLRGELARVAEQLARRGMALDMARIEALEERRKGLQTRVQELQNLRNTRSKAIGK
AKAAGQDIEPLKAEVAVFGDQLKAMNAELDVLQEQMREISLGLPNLPAADVPDGADENSN
REELRWGEPPSFAFEPRDHVDLGVPAGWLDFDAAAKLTSARFVVLSGPLARLHRALIQFM
LDVHGSEHGYREVYVPYLVNADSLTGTGQLPKFEADLFMVPGKEQSQGEQKERDFYLIPT
AEVPVTNLVRDVIVEDADLPCKWVAHTPCFRSEAGSYGKDTRGMIRQHQFEKVELVQAVR
PAESAAALETLTGHAQAILQRLGLAYRVVTLCTGDLGFAATKTYDLEVWLPGQQRYREIS
SCSNFGDFQARRLQARWRNPETGKPELLHTLNGSGLAVGRALVAVMENYQQADGSIVVPD
ALQPYMGGLRLLQPAG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacccgaaactattgcgtggcgaactggcccgggtggccgaacagctcgcgcgc
cgtggaatggctcttgatatggcgcgaatcgaggcgctggaggagcggcgcaagggcttg
caaacgcgtgtgcaggagcttcagaacctgcgcaacactcgatcaaaggcgatcggcaag
gcgaaggctgcaggacaggacatcgagccgttaaaagccgaggttgctgtgtttggcgat
cagctcaaggcgatgaacgcggagcttgacgtattgcaggaacagatgcgcgagatcagc
ctcggtttgccgaatctgcccgctgccgacgtgccggacggtgcggatgagaacagcaac
cgcgaggagctccgctggggcgagccgccgtcttttgcgttcgagcccagggaccacgtc
gatctgggcgtgccggcgggctggctggatttcgatgccgcggccaagctgacctcggct
cgttttgtggtgttgagcgggccgttggcgcgtttacatcgcgcgctgattcaatttatg
ctcgatgtgcatggcagcgaacatggctatcgtgaggtctatgtaccctacctggtcaat
gccgacagtttgaccggtaccgggcagttgcccaaattcgaggccgacctgttcatggtc
ccaggcaaggagcagagccagggtgagcaaaaggagcgggatttttacctgattccgacc
gccgaggtgccggtgaccaacctggtgcgcgatgtcattgtcgaggatgccgatctgccc
tgcaaatgggttgcgcatactccctgtttccgcagcgaagccggctcttatggtaaggat
acccgcggcatgattcgccagcaccagttcgagaaggtggagttggtgcaggcggtgcgt
ccagcggagtccgccgccgcgctggagaccctaaccggccatgcccaggcgattctgcag
cgcctggggctagcgtaccgggtggtgactctgtgcactggggatctcggctttgctgcc
accaaaacctatgacctggaggtttggctgcctgggcaacagcgttatcgcgagatctcc
tcatgcagcaatttcggcgatttccaggcgcgcaggctacaggcacgctggcgcaacccc
gagaccggcaagccagagctgttgcatacgctaaacggctctggactcgcggttgggcgc
gctttggtggcggtgatggagaattaccagcaggccgatggcagcattgtcgtaccggat
gcgttacagccttacatgggcggacttcgcctgttacagcccgctggctga
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