Candidatus Thiothrix singaporensis: HZT40_00110
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Entry
HZT40_00110 CDS
T06729
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
this03009
]
HZT40_00110
Enzymes [BR:
this01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HZT40_00110
Ribosome biogenesis [BR:
this03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HZT40_00110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QLQ30284
UniProt:
A0A7L6AME6
LinkDB
All DBs
Position
12889..13593
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AA seq
234 aa
AA seq
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MRLDQFVSQSTGMPRSEAQKLIRWGRVLVDGKGIAKPATHIGAXAVVTLDGVTISLPGAI
YIMLHKPAGVVSATEDPSHRTVMDLIGHPHRHTLHVVGRLDKDTTGLLLITNDGDWSHRL
MSPKHHVPKTYLATLAEPLVESAAEQLRAGVQLHGEKALTKPAEVEILPACQARITLHEG
KYHQVKRMFAAVGNRVEALHRESIGGLLLEAQLKPGAWRALTDAELELVYPRNR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagatcagttcgtcagtcaatccacaggaatgccgcgttccgaagcgcaaaag
cttatccgctgggggagggtattggtggatggcaaaggcattgccaaaccggcgacgcat
attggcgcannggctgtggtgacgctggatggcgttacgatttccttgcccggagccatt
tacatcatgctgcacaaaccggcaggtgtggtcagtgcaacagaagacccttcgcatcgc
accgtcatggatttgatcggccacccgcatcggcacacgctgcatgtggtggggcggctg
gacaaggacaccaccggcctgttgctgatcaccaatgatggcgactggtcgcatcggctg
atgtcacccaaacaccatgtgccgaaaacctatttggcgaccttggcggaacctttggtg
gaatcagcggcggagcaattgcgcgccggtgtgcagctgcatggggaaaaggcgctgacc
aaaccggcggaggtggaaatcctgcccgcttgccaagcacgcattactctccatgaaggc
aagtaccatcaggtcaagcgtatgttcgcggcggtgggcaaccgggtggaagccttgcac
cgggaaagcattggcggtttgctgttggaggcacagctcaagccaggcgcttggcgggcg
ctgacagacgctgaacttgaactggtttaccccagaaaccgctga
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