Candidatus Thiothrix singaporensis: HZT40_00635
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Entry
HZT40_00635 CDS
T06729
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
this03021
]
HZT40_00635 (rpoH)
Transcription machinery [BR:
this03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZT40_00635 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
UCR_14kD
GntR
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QLQ30362
UniProt:
A0A7L6AMK7
LinkDB
All DBs
Position
105481..106350
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AA seq
289 aa
AA seq
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MSNALMLRGQTLPVPVGNLESYIHAIHSIPVLEAEEERELAERLRYAGDLEAARQLILHN
LRFVVKVARGYSGYGLPLGDLVQEGNVGLMKAVKRFEPEMNVRLISFAVHWIRAEIHEFI
LRNWKIVKVATTKAQRKLFFNLRSSKQRLGWLNHEEAQAMAEDLGVSTAEVLEMEKRLSA
NDVAFDLSMDQEDDDSASFSPSQYLAADDADPAETLEAEEWDTYTRERFQDALAKLDARS
QDILANRWLVENKATLHELAEKYNVSAERIRQLENAAINKLRLGVMEAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcattgatgctgagaggacaaaccttgccggttccggtagggaatctggaa
agctacatccatgcgattcattccatccctgtgctggaagccgaagaagaacgcgaactg
gcggagcgtctgagatacgcaggcgatttggaggctgcgcgtcaattgatcctgcacaac
ctacgttttgtggtgaaggtggcgcgcgggtatagcggctatggcttgccactgggtgat
ttggtgcaggagggcaatgttggtttgatgaaagccgtcaaacgttttgaacctgaaatg
aatgtgcgcctgatctctttcgccgtgcattggattcgggcggaaattcacgaatttatc
ctgcgcaactggaaaattgtcaaagtggcgaccaccaaggcgcagcgcaagctgtttttc
aatctgcgtagcagcaagcagcggctgggatggctgaatcacgaggaagcccaagccatg
gctgaagatttgggcgtcagcacagctgaagtgctggaaatggagaaacgccttagcgcc
aatgatgtcgccttcgacttgagtatggatcaggaggacgatgactccgccagcttctca
cccagccagtatttggcagcggatgatgccgatccggcggaaacactggaagcggaagag
tgggacacttacacgcgggaacgctttcaggatgcattggcgaagttggatgcacgcagt
caagatattctggccaaccgctggttggttgaaaacaaggcgactctgcatgaactggca
gaaaagtacaatgtatctgccgaacgtatccgccaattggaaaatgcagccatcaacaaa
ctgcggttgggtgtgatggaagctgcgtaa
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