Candidatus Thiothrix singaporensis: HZT40_04705
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Entry
HZT40_04705 CDS
T06729
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
this03009
]
HZT40_04705 (rluD)
Enzymes [BR:
this01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HZT40_04705 (rluD)
Ribosome biogenesis [BR:
this03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HZT40_04705 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QLQ31014
UniProt:
A0A7L6APK7
LinkDB
All DBs
Position
919380..920327
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AA seq
315 aa
AA seq
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MPLNQQIINTVPPEMEGQRLDQAVASLYPQFSRSQIQKWIKAGHIRVDDKILKPKERLTG
GEEIVLNAVQEAQTEFEPEDIPLDIVYEDSAILVLNKPAGLVAHPAAGNWSGTLVNALLH
YHPGLEMLPRAGIVHRLDKDTTGLMVVAKTLEAHTRLVGLLQERDVSREYLALVSGQVVA
GSTIEANIGRHPVDRKKQAVTDGGKEAITHYRVEERFPHHTLLRVSLETGRTHQIRVHLS
WKHLPIVGDQTYGGRPRVPAGISEALRTALQTFPRQALHATRLGLVHPESGEYLEWERLP
EDMAALLDLLRKEVA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaaccaacagataattaacacggttcctcccgaaatggaaggacaacgcctt
gaccaagctgtcgccagtttgtacccccaattttcccgcagccaaatccagaaatggatc
aaggccgggcatattcgtgtcgatgataaaatcctcaaacccaaggaacgcttaaccggc
ggtgaagaaattgtgctgaatgcggtgcaggaggcgcagaccgaatttgagccggaagac
atcccgctcgacatcgtctacgaagacagcgccatcctggtgctcaacaagcctgccggt
ctggtggcgcacccggcggcgggcaactggtctggcaccttggtcaatgccttgctgcat
taccatcctgggctggagatgctgccgcgcgctgggattgtccatcgcctcgacaaggac
accaccggcctgatggtggtcgccaaaacgctggaggcacatacccggctggtcgggctg
ttgcaggagcgcgatgtcagccgcgaatatctggcgctggtttccgggcaggtggtggca
ggctccaccatcgaagccaatatcggccgccatcctgtcgaccgcaagaaacaggccgtc
actgacggcggcaaggaagccatcacacattaccgcgtggaagagcgttttcctcaccac
accttgctgcgtgtctcactggaaaccgggcgcacccaccagatccgcgtccacctgagc
tggaagcatctgccgatcgtgggcgaccagacctatggtggccgaccacgcgtgcccgcc
ggaatcagcgaggcgctgcgcacggcgctgcaaacctttccgcgccaagcattgcatgca
acccggctggggttggtgcatcctgaaagcggcgaatacctggaatgggagcggctgccg
gaggatatggcggcgttgctggatttgttacgtaaggaagttgcatga
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