KEGG   Candidatus Thiothrix singaporensis: HZT40_05055
Entry
HZT40_05055       CDS       T06729                                 
Symbol
rep
Name
(GenBank) DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
this  Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:this00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:this03400]
    HZT40_05055 (rep)
Enzymes [BR:this01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HZT40_05055 (rep)
DNA repair and recombination proteins [BR:this03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HZT40_05055 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: QLQ31071
UniProt: A0A7L6APT4
LinkDB
Position
complement(988256..990250)
AA seq 664 aa
MQGLNPQQQEAVTHLGTPLLVLAGAGSGKTRVITQKIAWMIRKGVHSADQIAAITFTNKA
AREMRERASKLLSKEEARGLTVSTFHTLGLNIIKREAKRLGYKSNFSILDAQDSGAILKE
LAHKEEVEEADGMRWIISRWKNDFISXEQAAQQANTPDEKLAAILYEKYQRQIKAYNAVD
FDDLIVLPVKLFEQHPDALQHWQNKLRYLLVDEYQDTNACQYRLIRLLSGMRGALTAVGD
DDQSIYAWRGARPENIIQLQRDYPMLKVVMLEQNYRSTSRILHSANQLIGNNPHLFAKXL
WSTLGEGDPIRIMPCRTPDNEADKVVGEILKKRFRDRAAYKDFAILYRSNHQSRLFEKAX
RENNIPYKLTGGTAFFERSEVKDILAYLRLIANPDDDAAFLRIINTXKREIGTSTLEKLG
EYAHERHSSLFAAAQELGFAQRISAKAQQRVETFSFWLHEMVGAAEGADPTKIVRQVITD
IAYEDWQKNTCNTPKQAEARMKNVWEIVEWVRKLHDDGAGKESLSDIIAHMSLVDMLERN
SEEQEQDAVALMTLHAAKGLEFPNVFLVGMEEELLPHANSLDEHGIQEERRLAYVGITRA
QKHLVISYAKVRSRYGESSTVEPSRFLDELPAQHLEWDNKKVVSDEERQATAQAYIANLK
DLLG
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgcaaggactcaacccccaacaacaagaggctgtcacccacctcggcacaccgctattg
gtgctggcaggcgctggcagtggcaaaacccgcgtcatcacccagaaaatcgcctggatg
atccgcaagggtgtgcattccgccgaccagatcgccgcgatcaccttcaccaacaaggcc
gcccgcgaaatgcgcgaacgcgccagcaagctgttgagcaaggaagaagcccgtggcctg
accgtttccaccttccacacccttggcctcaatatcatcaagcgcgaagccaaacggctg
ggttacaaaagcaacttcagcatcctggatgcgcaggacagcggagccatcctcaaggaa
ctcgcccacaaagaggaggtcgaggaagcggacgggatgcgctggatcatttcccgctgg
aaaaacgatttcatttccnccgaacaagccgcgcagcaagccaatacgccagatgaaaaa
ctggccgccatcctctacgaaaaataccagcggcagatcaaagcctataacgcggtcgat
ttcgatgacctgatcgtattgccggtgaagctgttcgaacaacacccggatgccctgcaa
cactggcaaaacaagctgcgttacctgctggtcgacgaataccaggacaccaacgcctgc
caataccgcctgatccgcctgctgtccgggatgcgcggcgcactcactgccgtaggcgat
gacgaccagtcgatctacgcctggcgcggcgcccgcccggaaaacatcatccagctccag
cgtgactacccaatgctcaaagtcgtgatgctggaacagaattaccgttccaccagccgt
attctccacagcgccaaccaactgatcggcaacaatccgcacctgtttgccaaanacttg
tggagcacgctcggcgaaggcgacccgatccgcatcatgccttgccgcacgccggacaac
gaggccgacaaggtcgtcggggaaatcctcaagaaacgtttccgcgaccgcgccgcttac
aaggatttcgccatcctttaccgcagcaaccaccaaagccgcctgtttgaaaaggccntg
cgcgagaacaacatcccctacaagctcactggcggcacggcgtttttcgagcgctccgaa
gtcaaggacatcctcgcctacctgcgcctgatcgccaacccggacgatgacgccgctttc
ctgcgcatcatcaacaccnccaaacgcgaaattggcacctccaccctggaaaagctcggt
gaatacgcccacgaacgccattccagcctgttcgccgccgcgcaggagcttggctttgcc
cagcgcatttccgccaaagcccaacaacgggtggaaacgttcagcttctggctgcatgaa
atggtgggtgccgctgagggcgctgaccccactaaaatcgtccgtcaggtgatcactgac
attgcttacgaagactggcagaaaaacacctgcaacaccccgaagcaagccgaagcccgc
atgaaaaacgtgtgggaaatcgtcgaatgggtgcgcaagctgcacgacgacggcgcaggc
aaggaaagcttgtccgacatcatcgcccacatgagcctggtcgacatgctggagcgcaat
agcgaggaacaggagcaggacgccgtggcgctgatgaccctgcacgccgccaaagggctg
gaatttcccaacgtcttcctggtcggcatggaggaggaactgctgccccacgccaacagc
ctcgacgagcacggcatccaggaagaacggcgactggcctacgtcggcattacccgcgca
cagaaacacctcgtcatcagctacgccaaagtgcgttcacgttacggggaatcctccacc
gtcgagcccagccgtttcctcgacgaactcccggcacaacatctggagtgggacaacaaa
aaggtggtgtcagatgaagagcggcaggcgaccgcacaagcctatattgccaacctgaaa
gacctgctgggataa

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