Candidatus Thiothrix singaporensis: HZT40_06715
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Entry
HZT40_06715 CDS
T06729
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
this03032
]
HZT40_06715
03036 Chromosome and associated proteins [BR:
this03036
]
HZT40_06715
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_06715
DNA replication proteins [BR:
this03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HZT40_06715
Chromosome and associated proteins [BR:
this03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HZT40_06715
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HZT40_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QLQ31341
UniProt:
A0A7L6AQF6
LinkDB
All DBs
Position
1329695..1330000
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSEIIDILARKQSHLSSRDVELSVKLLLDKMSESLADGGRIEVRGFGSFSLHHRAARX
GRNPKTGDQVSLPPKHVPHFKPGKELRERVNESRSQYPIQD
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaaatcattgatattcttgcgcgcaagcaaagccatctaagtagccgc
gacgtagagctgtctgtcaaattgctgttggacaaaatgagcgaatcattggcggacggc
gggcgtattgaggttcgtggttttggcagtttttccctgcatcatcgtgcagcacgtaan
ggccgaaaccctaaaacaggggatcaagtttctttgccgcccaaacatgtcccgcatttc
aagcctggaaaggagttgcgggagcgggtcaacgaatcacgtagccagtaccccatccag
gactga
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