Candidatus Thiothrix singaporensis: HZT40_06820
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Entry
HZT40_06820 CDS
T06729
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03030
DNA replication
this03430
Mismatch repair
this03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZT40_06820 (holB)
03430 Mismatch repair
HZT40_06820 (holB)
03440 Homologous recombination
HZT40_06820 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
this03032
]
HZT40_06820 (holB)
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_06820 (holB)
Enzymes [BR:
this01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZT40_06820 (holB)
DNA replication proteins [BR:
this03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZT40_06820 (holB)
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZT40_06820 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QLQ31356
UniProt:
A0A7L6AQG2
LinkDB
All DBs
Position
1349274..1350221
Genome browser
AA seq
315 aa
AA seq
DB search
MIYPWQAGAWATVQRAIAGNHLHHALLATGEEGCGNEAFIRSLAQSLLCQHPATDGVACN
QCRSCQVFAAQAHPDFIFISLLEDKQSILIEQIRELNYFLGLSRSYSPRRVAIITPAERM
NINAANSLLKSLEEPAADTHLLLLTAQPAVLLPTIRSRCQEIRLPPPPHQIALARLQTQE
LQNPPDRLLDIARGRPLEALNLDTTGILAERQQWLGHLTQLAQGNGNITDISVYWEKYDR
IRLLDWQLEWXFFLIKHYVIREKQPIPDELKPLSLVVKENRVFQIHDSLMELKKFATHPL
NSRSYIESMLILWGI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgatatacccttggcaagccggtgcctgggcaaccgtgcaacgggcgatagcaggcaac
catctgcatcatgccttgctggccactggggaagagggttgtgggaacgaagctttcatc
cgctccttagcgcaaagcctgctttgccaacatcctgccactgatggggtcgcctgcaat
cagtgtcgcagttgtcaggtntttgctgcgcaagcgcaccctgatttcatattcatttcc
ctgctggaagataagcagagcatcctgattgaacagatccgcgaactgaattacttcctg
ggtcttagccgcagttatagcccccgccgtgtcgccattatcaccccggcggaacgcatg
aacatcaacgccgccaatagtctgctgaaatcactggaagaacctgcggcggatacccat
ctcctgctgctgacagcgcaaccagcggtgctgttgccgactatccgtagccgttgccag
gaaatccgcttgccgccgccgccccaccaaattgcattggcacggttgcaaacgcaggaa
ttgcaaaatccgcccgaccgcctcctggatattgctagaggaaggcctttggaggcnctg
aacttggacaccacaggcattcttgcagaacgtcagcaatggttggggcacttgacccag
ttggctcaaggaaatggcaacatcacggatatttccgtatattgggaaaaatatgacaga
atacgactgttggattggcagcttgagtggatnttttttctgataaaacattatgttata
agagaaaaacaaccnattcctgatgaattgaaaccattgtccctggttgttaaggagaat
agggtgttccaaattcatgacagcttgatggagcttaaaaaatttgccactcatcctctc
aattcccgttcatatattgaatccatgctaatattgtggggcatataa
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