Candidatus Thiothrix singaporensis: HZT40_08425
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Entry
HZT40_08425 CDS
T06729
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZT40_08425 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_08425 (uvrB)
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZT40_08425 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZT40_08425 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
DUF87
P-loop_SecA
PMT2_N
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QLQ31607
UniProt:
A0A7L6ARL9
LinkDB
All DBs
Position
1690530..1692554
Genome browser
AA seq
674 aa
AA seq
DB search
MSEIDQFQLNTSYQPAGDQPEAIRSLVEGLHDGLLHQTLLGVTGSGKTFTMANIIQQTQR
PAIILAHNKTLAAXVYGEMQEFFPKNAVEYFVSYYDYYQPEAYVPSKDVYIEKDASINDH
IEQMRLSATRNLFERKDVIIVATVSSIYGLGDPESYLKMLLILVRGDRIDQRSILRRLAE
MQYTRNDLDLQRGAFRVRGEVIDIHPAESDREAIRIELFDDEIDSLSYFDPLTGEVLRRV
RRLTVYPKTHYVTPREVLLEAVDHIKAELKERLAVLRSHDRLVDTQRLEQRTQYDIEMIV
ETGYCSGIENYSRYLSKRPAGAPPPCLFDYLPRNAIVFVDESHVTIPQFGGMYKGDRSRK
ETLVEYGFRLPSALDNRPLRFDEFEQLIPQAIHVSATPGAYELEHSGNVAEQVVRPTGLV
DPEVEVRPVLSQVDNVMSEITERAQRNERVLVTTLTKRMAEDLTDYLMNHNIKVRYLHSD
IDTVERVEIIRDLRKGEFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNAEGKAILYADKITDSMHKAMDETSRRRAKQTSFNAAHGITPQTIRKRIADVMEG
AYANASRGKGKTRADXKVAEEAAEYRSLTPDQALKQIKKLEDKMFQHARNLEFEQAAAVR
DQIAHIRARVFGLE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattgaccaattccagctcaataccagctatcagcccgctggtgaccaaccg
gaagccatccgctccttggtggaggggctgcatgacggcctgctgcaccagaccctgctg
ggcgtaaccggctccggcaaaaccttcaccatggccaacatcatccagcaaacccagcgc
ccggccatcattctggcgcataacaagacgctggcggctnnggtgtatggggaaatgcag
gaatttttcccgaagaatgcggtggaatactttgtttcctattacgattattaccagccg
gaggcttatgtcccatccaaggatgtctacatcgaaaaagatgcctccatcaatgaccac
atcgaacaaatgcgcctgtcggccacccgcaatctgttcgaacgcaaggatgtcatcatc
gttgccacggtttcctccatctatggcttgggcgatccggaatcctacctgaaaatgctg
ttgatcctggtgcgcggcgaccgtatcgaccagcgcagcatcctacggcggctggcggaa
atgcagtacacccgcaatgacctggatctgcaacgcggtgccttccgggtgcgtggcgaa
gtgatcgacatccacccggcggaatccgaccgggaagccatccgtattgaactgttcgat
gatgaaatcgacagcctcagttattttgacccattgaccggcgaagtcctgcgtcgggtc
cgncgtttgacggtttaccccaaaacccattacgtcacgccccgcgaagtgttgctggag
gcggttgaccatatcaaggcggagctaaaggagcggctagcggtgttgcgcagccatgac
cggctggtggatacncaacgcctcgaacagcgcacccaatatgacatcgaaatgattgtt
gaaaccggctattgctccggcatcgaaaactactcgcgttacctgtccaaacgcccggca
ggcgcgccgccaccctgcctgttcgactatctnccccgcaatgccatcgtgttcgtggac
gaatcccatgtcaccattccccaattcggcggcatgtacaagggcgaccgttcgcgcaag
gaaacgctggtggaatacggtttccgcctgccctccgccctcgacaaccgtccgttgcgc
tttgacgaattcgagcagctgattccacaggccatccatgtatccgccaccccgggcgcg
tatgagctggagcattctggcaatgtcgccgaacaggtggttcgtcctaccggcctggtg
gatccggaggttgaagtccggccagtattgagccaagttgacaatgtgatgtccgaaatc
accgagcgcgcgcagcgtaatgaacgtgtcctggtcactaccctgaccaagcgcatggcg
gaagacctgaccgactacctgatgaaccacaatatcaaggtgcgctacctgcattccgat
atcgacacggtggagcgggtggaaattatccgtgacctacgcaaaggtgagttcgatgtc
ctgataggcatcaacttattgcgggaggggcttgatataccggaagtttcactggtcgcc
atcctggatgccgataaggagggtttcctgcgctccgaacgttccctgatccagaccatt
ggccgtgcagcacgcaatgctgaaggcaaggccatcctttacgccgacaaaatcaccgac
tccatgcacaaggcgatggatgaaaccagccgtcgccgcgccaaacagaccagcttcaac
gcagcccacggcattaccccacaaaccatccgcaagcgtatcgccgatgtgatggaaggt
gcctacgccaacgcctcccgtggcaagggcaaaacccgtgctgacaanaaagtggcggaa
gaagcagccgaataccgcagcttgacgcccgaccaagcgctcaaacaaatcaagaaactg
gaagataagatgttccaacacgccaggaacctggaattcgaacaggccgctgccgtgcgc
gaccagatcgcccatatccgcgcccgggtgttcgggctggaataa
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