Candidatus Thiothrix singaporensis: HZT40_09115
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Entry
HZT40_09115 CDS
T06729
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
this00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HZT40_09115 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
this03000
]
HZT40_09115 (nifA)
Transcription factors [BR:
this03000
]
Prokaryotic type
Helix-turn-helix
Other families
HZT40_09115 (nifA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
AAA_16
AAA_2
nSTAND3
AAA_3
GAF_3
HTH_23
Parvo_NS1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QLQ31724
UniProt:
A0A7L6ARP8
LinkDB
All DBs
Position
complement(1820127..1821698)
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AA seq
523 aa
AA seq
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MSDGRDASQLEQTLTLLEDELACIYEVSKVLNRSLNLSDSLREVLRVLHEQGQLEHGMVS
LLDEASGDLLLWELHRQDKPTVDNVRYRSGEGIMGLVMEMDKPLIIRKLADEPRFLDRLG
VYNSALPLIAVPIRARGDEIVGVLAAQPPAELHLLAERRRFLEMVGNLIGQNVVLANQVA
NDRQELQKERDSLRRKVKGDYGFGNLIGRTRVMQTVFEQARQVAKWNTTVLIRGESGTGK
ELIANAIHYHSPRANNAFIKLNCAALPDNLLESELFGHEKGAFTGAVSQRKGRFEQADGG
TLFXDEIGEITPAFQAKLLRVLQEGEFERVGGSKTLQVDVRVIAATNRNLEEEVRVGDFR
EDLYYRLNVMPIVMPPLRERLEDVPDLAXFLVNKISQKQXRPLDIGDSAIRSLMHHSWPG
NVRELENCMERAAILSPDGHIDAQVIRLSGLDSSQPFAVAESSSAGNKAKIDFNDPDLDE
RERVIAALEEAGWVQAKAARLLNMTPRQIAYRIQTLNIQVRQI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgggcgcgacgcctcccaactggaacagaccctgaccctactggaagacgaa
ctggcctgtatctacgaagtcagcaaggtgttgaaccgttccctgaacctgtcggacagc
ctgcgcgaagtgttgcgcgtcctgcatgagcaagggcagttggagcacggcatggtcagc
ctgctggatgaggccagcggcgacctgttgctgtgggagctgcaccggcaggacaaaccg
acggtggacaatgtgcgctaccgttccggcgaaggcatcatggggctggtcatggaaatg
gacaaacccctgattatccgcaagttggccgatgagccacggtttctcgaccggctcggt
gtctacaattccgccctgccgctgatcgccgtgccgatccgtgcgcgcggcgacgaaatc
gtcggggtattggccgcccaaccgcctgcggagctgcacctgctggctgaacgccgccgt
ttcctggaaatggtcggcaacctgatcggccagaacgtggtgctcgccaaccaggtcgcc
aacgaccggcaggaattgcaaaaggagcgcgattcgctgcgccgcaaggtcaagggtgat
tatggctttggcaacctgatcgggcgcacccgcgtcatgcagaccgtgtttgaacaggcg
cggcaggtggcgaaatggaacaccactgtgctgatccgtggcgaatccggcaccggcaag
gaactgatcgccaacgccatccactaccattcgccgcgtgccaacaacgcttttatcaag
ctcaattgcgccgccttgcccgacaacttgctggagtccgaactgttcgggcatgaaaag
ggcgcgttcaccggcgcggtcagccagcgcaaggggcgtttcgagcaagccgatggcggc
accctgttcntggatgaaatcggtgaaatcacccccgcgttccaggccaaactgctgcgg
gtgttgcaggaaggcgaattcgagcgcgttggcggcagcaagacattacaggttgacgtg
cgcgtgatcgccgccaccaaccgcaatctggaagaggaagtgcgcgtcggtgatttccgc
gaggatctgtattaccgcctcaatgtcatgcccatcgtcatgccgccattgcgtgaacgc
ttggaagacgtgcccgacctggccngtttcctggtcaacaagatcagccagaaacagngc
cgcccgctggacatcggcgacagcgccatccgctccctgatgcaccacagctggccgggc
aatgtgcgcgaattggaaaactgcatggagcgcgccgccatcctcagtccggacgggcat
atcgacgcccaggtgatccgcctcagcgggctggacagcagccagccttttgccgtggca
gagagcagcagcgccggaaacaaggcgaagattgatttcaacgaccccgacctcgatgaa
cgtgagcgcgtgatcgccgccctggaagaagctgggtgggtgcaggccaaagctgcccgt
ttgctgaatatgacgccacgacaaattgcctaccgtatccaaacactaaatattcaagta
cggcaaatctga
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