Candidatus Thiothrix singaporensis: HZT40_10845
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Entry
HZT40_10845 CDS
T06729
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_10845
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZT40_10845
Archaeal homologous recombinant proteins
HZT40_10845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
HAGH_C
Motif
Other DBs
NCBI-ProteinID:
QLQ32000
UniProt:
A0A7L6ASB3
LinkDB
All DBs
Position
complement(2152981..2156652)
Genome browser
AA seq
1223 aa
AA seq
DB search
MRIQQIRLKXLNSLSGEWSIDLTQPAFVSDGIFAITTXTGAGKTTILDAICLALYGRTXX
LDKVTKTANEIMSRNTGECFAEVAFATQDGEYRIQWSQRRSRKKSDGELQQPHHELSTIN
PEKIIASGLREVAETVETLTGLDFERFTRSILLAQGSFATFLNANPGERAPILEKITGTD
IYSSISMKVHDRTRIERDKLQKLQQAVQGMRLLNETEELQYRQELQQHQEAAKSLDTQLL
QSEQHLIWLQTINTLEQELTRLTTDLTELSRKQETFRPEQERLDKANKALELDGDHARMD
GLRKQQETEKQRHARLLETIPLQESAAQQTGQALETAQSKLLSQQQIQKELAXILTAVRE
LASKHKERVDLIRQANLELDGFHGKLAALEEQQQAAQQHLTTTITDLAAINQFLETHQAD
QRLVSDFSGIQQQFNQLRQWQVETTGIRQQLGEAEEKLTTAKTTLAATEADVTAHRQQQA
NTHQTLIELEAGFNQLLQGKTLADWRQTLNDLRDRETLQNKLGEQIHSQLTARNRLTTLQ
NQQAQYQEEQGKLTHSIELHVTAQTRLEERAGHLEERQTLLRTIQSLEEHRHQLQDGSPC
PLCGSLEHPYASGNTPRQGETDEELRRTRQELKETQQQLAGFREQLAGLQQNQQHNLTQQ
ADCQQEVDGLTVQIRVAFATLQPGIEEENWATSLHTSNSKQLHNWRKSDSRYRMQRNRKS
SSTLCEPSSSNSRTLSGNWKVLPSRPTITTRLPTTPASGXSAGSGEXSDTQLSQALANIG
VHLQAYGIHTLSLAELANTETALSQRRERWLEQSAEGERLKQQQETLQQQLRLEQQIRER
QEETAKQQTKLGSLEQEAANLTQKRVELFGDKQPDMEETGLQQAVEDAAKQRDTSQQNAH
DANTQLQQSRNEAGTLESAIAERNQQLQSMEATFQTRLQIQGFESERAYLDARLPDTERQ
QLSLQSXTINNRTGSSGNFSPGQTLATGARTQQTTDGTNNRHVGTAADHCKAELPRLQQQ
IGAINDKLNGNEQVRKQQVAIRQSIEQQQVECLRWDNLHELIGSSDGKKYRNFAQGLTFE
VMVSHANQQLSKMSDRYLLIHDHRQPLELNVIDNYQAGEIRSTRNLSGGESFIVSLALAL
GLSHMASQNVRVDSLFLDEGFGTLDEEALDTALETLAGLQQDGKLIGVISHVQAMKERIS
TQIRVNPLTGGRSTLXGXGCHSK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccagcaaattcgcctgaaanacctcaactccttgtctggtgagtggagtatc
gaccttacccagcctgcctttgtatcagatggcatttttgccatcaccactgnnaccggc
gcgggtaaaaccactatccttgatgctatctgtctggcgctgtatggccgtaccnccnga
ttggataaagtcaccaaaaccgccaatgaaatcatgtcccgtaataccggtgagtgcttc
gcggaagtagcctttgccacgcaggatggagaataccgcatccagtggagccagcgccgt
tcccgcaaaaaatctgatggcgaattgcagcaaccccatcatgagttatccaccattaac
ccggagaaaatcatcgcctccggcttacgcgaggttgcagaaacagtagaaacattgacg
ggtttggactttgagcggttcacccgttccatcctgctggcgcaaggtagctttgccacc
ttcctcaatgccaatcccggtgagcgtgcgcccatactggaaaagatcaccggcaccgat
atttacagcagtatttcgatgaaggtacatgaccgcacccggattgagcgtgacaaactc
cagaaactgcaacaagccgtgcagggtatgcgcctgttgaacgagacggaagagcttcaa
taccggcaggagttgcaacaacatcaggaagcggccaagagtttggacacccaactgctc
cagagtgaacagcatctgatctggctccagaccatcaacacactggaacaggaattaacc
cggctaacaaccgacctgactgaactctcccggaaacaggagacattcagacctgaacag
gaacggctggacaaggccaacaaggcactggaactggacggcgaccatgcccgcatggat
gggttacgcaaacagcaagagaccgagaaacaaaggcacgccaggttgctggaaaccatc
cctcttcaggaatccgctgcccaacaaactgggcaggcactggaaacagcacaaagcaag
ttgttaagccagcagcagattcagaaagaactggctntcatcttgaccgccgtcagggaa
ctggccagcaaacacaaggagcgcgtggacttaatccggcaagccaacctagaacttgat
ggatttcacggcaagctggcagcccttgaggaacagcagcaggctgctcaacagcatttg
acgacaacaattactgatttagcggctatcaaccagtttctggaaacccatcaggctgac
cagcgtctggtatcggacttttccggtatccagcaacagttcaaccagctacgccagtgg
caagtagagacaaccgggatacgccagcagttgggagaagcagaggaaaaactgactact
gccaaaaccacactggcagcgacggaagcagatgtaactgcccatcgccaacaacaggca
aacacccaccaaaccctcattgagctggaagcaggctttaaccagttgctacaaggcaaa
acgctggcagactggcggcaaaccctgaatgacctaagagacagagaaaccctgcaaaac
aaactgggggaacagattcactcacagttgactgccagaaacaggctcaccaccctccaa
aaccaacaggcgcaatatcaggaggagcagggcaaactgacgcacagtatcgaactgcat
gtgactgcccaaaccagactggaagaaagggcggggcatctggaagaacgccaaaccttg
ctgagaaccatccagtcactggaagagcaccgtcaccaactacaggacggttcaccctgt
ccactctgtggttcactggaacacccctatgccagcggcaatacgcctcgtcagggtgaa
acagatgaagaacttcggagaaccaggcaggaactcaaggaaacccagcagcaattggcc
ggttttcgggaacaactggccggacttcagcagaaccagcaacacaacctcacccagcaa
gccgattgccagcaggaagttgacggcctgacagtccaaatccgtgtagcgtttgcgacc
ctgcaaccgggtattgaggaagaaaactgggcgacaagcttgcataccagcaacagcaaa
cagttacacaactggcgcaaatcagacagcaggtacaggatgcagaggaacaggaaaagc
agctcaacgctttgcgaacccagctccagcaacagcaggacactctccggcaactggaaa
gtgctgcccagcaggccaaccataaccaccagactgccaacgacacctgcaagcggctnn
tcagcaggaagtggggaagnntccgacacccagctatcgcaagcattggccaacatagga
gtccacctgcaagcttatggcatccataccctgagccttgcagagctcgccaatacagaa
acagctttgtcccagcgccgcgagcgatggctggagcaaagcgcagaaggggagagactc
aaacagcagcaggaaaccctgcaacaacaactacgccttgaacagcaaatcagggaacgc
caggaagagaccgctaagcagcaaaccaaactgggttcactggaacaggaggctgccaac
ctcacccaaaaacgtgtagaacttttcggggacaaacagccagacatggaagaaaccggc
ttacagcaagccgtcgaagatgccgcaaagcagcgtgataccagccagcaaaacgctcat
gatgccaacacacaacttcaacaatcccggaacgaggcaggcaccctggagtcagctatc
gcagagcggaaccagcagctacagtcgatggaagctacctttcagacccgactacagata
caggggtttgaatccgaacgcgcttacctggatgcacgcctgccagacactgaacggcag
caacttagcctgcaatcancaacgattaacaacagaacaggctcgtctggaaacttctca
ccgggacaaacactcgcaactggcgcaagaacgcagcaaacaactgacggaacaaacaac
agacacgttggaacagcagcggatcactgcaaggcagagctaccccggcttcagcagcag
attggggctatcaatgacaagttgaatgggaatgaacaggtcaggaagcaacaggtagca
atacgtcagtccattgagcaacagcaggtagaatgcctgcgttgggataacctgcatgag
ctgatcggctcctccgatggcaagaaataccgcaacttcgcacaagggctaacgttcgag
gtcatggtcagccatgccaaccaacaactgagcaagatgagcgaccgttacctgctgatc
catgatcaccggcaacctctggagctgaatgtcatcgacaactatcaggcgggtgagatt
cgttctacccgtaacctgtcgggtggtgagagtttcatagtcagtctggctctggctctg
gggctgtcgcacatggccagccagaatgttagggtggattcactgttcctcgatgaagga
ttcggcacgctggatgaggaagcactggataccgcgctggaaaccctggcgggtttgcag
caggacggcaagctgataggggtaatttctcacgtgcaagccatgaaagagaggatcagc
acccagatacgggtcaacccgctcactggaggacgtagtacgcttncaggcncgggatgc
cacagtaaatag
DBGET
integrated database retrieval system