Candidatus Thiothrix singaporensis: HZT40_13460
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Entry
HZT40_13460 CDS
T06729
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZT40_13460 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_13460 (recC)
Enzymes [BR:
this01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HZT40_13460 (recC)
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZT40_13460 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QLQ32423
UniProt:
A0A7L6ATN7
LinkDB
All DBs
Position
complement(2676966..2680118)
Genome browser
AA seq
1050 aa
AA seq
DB search
MLRLHHSNQLERLAEQFARLQAAEPLPPLETERVVVQNIGMGRWLSLQTAQHIGVAANIR
YLFPAEMTWELLRLVLRDVPVQDPCAAHILRWRLLDIFXCEPEQWPELERYLGAGESAAW
QLAGQLAKAFDQYLFFRPDWIREWESGNGSGDDWQARLWRQMVGERQLPHWVRLQERFAH
ALGMIDVSVLPRRISXFSVPVLSPGYVQLLGEVGQYIDIDFYLLNPCEEYWGDIESEKRK
HKQQADVQDYFSVGNPLLASWGRQGRDFIDLLIGAEADMDGXPLFAEPDGATLLGRIQAD
ILHLQMPELXPLPLAGEGLGKGGVPSLAVHACHSPMREAEVLYDQLLALFAANPDLTPAD
VAVMTPDIDTYAPYLDAVFSSAEHPLPFSIADRSPGYAQSIINLCECLLALPQGRCDAES
VLALLEFEEVRAHIGLDEAQVRQCRAWIRAVNIRWGXDAAARPDLGGADTAEHTGXYGLD
RLLLGYAMPGEELFGGVLPWNDIEGSQAEMLXRLQQVLEAVFELAGWRWQQQAVTEWNHR
IRRLLETVVGEDAPLQTLWQALETLERTLAQAGFGQPLXRPVYQDALLEQLDKRSESEGF
LXRGVTCCALMPMRTVPFRFVALIGMNDGVFPRRDTRASFDRMGQQLRRGDRLKRDEDRY
LFLESLLSARDWLYVSYIGQSPRDNSELPPSVLVSELLDYVERCAPGSRESLLTRHPLQA
FSRQYLRGERGLFTYSAYGQGQTAEDAAKAVCLPFWQXETLPEPDPAYRQVSLAELIRFY
QHPGRAFLKGRFGLRLAEAGEELPVREPFTLEQYSDRDVRACIFRQLQRGLPAASALPLL
RAQXLLPHGKPGELAFQQEVGVTEAFFQAIQPVPELRREYFSLALDGFHLSGVIGGLDAG
SGRRIDELGNLSYWNWLDIWLHHLALNALETPVCPRYTRVHSPDRHYQLQPVADARGQLQ
QLLDWYWRGLREPLPFFPKSGFNLMEQGEPDISRVMSTWEGSGNFSGESEKPEYRLLYRG
VNPLEGQADAFLEIAGYVFGGLFAARSTLD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcttgcaccattccaaccagcttgaacggcttgcggaacaatttgcccgtttg
caggccgcagaacccttgccgccactggaaacggaacgggtggtggtgcagaacattggc
atggggcgttggctttccctgcaaacggcgcagcacattggcgttgccgccaatatccgc
tacctgtttccggctgaaatgacctgggaattgctgcgtctggtgttgcgcgatgtgccg
gtgcaagacccgtgcgcggcgcacatcctgcgctggcgcttgctcgacatctttntgtgc
gagccggagcagtggccggaactggagcgctaccttggcgcaggcgaatccgctgcctgg
caattggccggacaactcgccaaggcgtttgaccagtacctgtttttccgcccggactgg
attcgtgagtgggaaagcggcaacggctccggcgatgactggcaggcgcggctgtggcgg
cagatggtgggcgaacggcaactgccgcattgggtgcgtttgcaggagcgtttcgcccac
gccctcggcatgattgatgtttcggtattgccccggcgcatcagtnttttctccgtgccg
gtgctgtcgcccggctatgtgcaattgttgggggaagtcggccaatacatcgacatcgac
ttctatttgttgaacccctgcgaggagtactggggcgacatcgaatccgaaaagcgcaag
cacaaacagcaggctgacgtgcaggattatttcagcgtcggcaacccgctgcttgcgtcc
tgggggcggcaggggcgggatttcatcgacctgctgatcggggcggaagcggatatggat
ggcncacccctgtttgcagagccggacggtgccaccctgctggggcgcatccaggccgac
atcctgcatttgcaaatgcctgagctcncacccctccccttggcgggagaggggttgggg
aagggtggggttccctccctcgctgtccacgcctgccattcgccgatgcgcgaggcggaa
gtcctgtacgaccagttgctggcgctgttcgcggccaacccagacctgacgcccgcagat
gtggcggtgatgacgcccgacatcgacacttatgcgccgtatctggatgcggtgttttcc
agcgccgaacatcccctgccattcagtatcgccgaccgcagccctggctatgcgcagagc
atcattaacttatgcgaatgcctgctggcgctgccgcaaggccgctgtgacgccgaaagc
gtgctggcgttgctggaatttgaggaagtgcgcgcccatatcggtctggatgaagcccag
gtgaggcaatgccgcgcctggatacgcgccgtcaatatccgctggggtcnngacgccgcc
gcgcggccagacctagggggcgcggacactgccgaacacaccggcngctacgggctggac
cgtctgctgttgggttacgccatgccgggtgaggagctgtttggcggcgtgctgccctgg
aatgacatcgaaggcagccaagccgaaatgctgngccgcctgcaacaggtgctggaggcc
gtgttcgagctggcgggctggcgctggcagcaacaggcggtgacggaatggaaccatcgc
atccgccgcctgctggaaaccgtggtgggcgaagatgcgcccctgcaaacgctgtggcag
gcgctggagacgctggagcggacgctggcgcaagccggtttcggccaaccgctcngccgg
ccggtgtaccaggacgccttgctggagcaactggacaagcgcagcgagtcggaaggcttc
ctgngccgtggtgtcacctgctgcgccctgatgccaatgcgcactgtgccgttccgcttc
gtcgccctgattggcatgaatgatggtgtgttcccgcgccgtgatacccgcgccagtttc
gaccggatggggcagcaactccgccggggcgaccgcctcaaacgcgatgaagaccgttat
ttgttcctggaaagcctgctgtcggcgcgtgactggctgtatgtcagctatatcggccag
agcccacgcgacaacagcgaactgccgccttccgtgctggtcagcgagctgctggattat
gtggagcggtgtgcgccgggcagccgggaaagcctgctgacccggcatccgttacaggcg
ttcagtcggcaatacctgcgcggcgaacggggtttgttcacttacagcgcatacggtcag
gggcaaacggcggaggacgccgccaaggcggtctgcctgccgttctggcagngggaaacc
ttgccggagccagacccggcctaccgtcaggtcagtctggccgagctgatccgcttttat
cagcatccggggcgggctttcctgaaggggcgcttcggcctgcgtctggcggaagcgggc
gaggaactgccggtgcgtgaacccttcaccctggagcagtacagcgaccgtgacgtgcgc
gcctgcattttccggcagttgcagcgggggctgcccgccgccagtgcattgccgttgttg
cgggcgcagngcctgttgccgcatggcaagcccggcgagctggcgttccagcaggaggtg
ggcgtcaccgaggcgtttttccaggcgatccagccagtgccggaactgcggcgcgaatac
ttcagcctggcgctggacgggttccacctcagcggcgtcattggcggcctggatgcaggc
agcgggcgcaggatcgatgagctggggaatttgagctactggaactggctggacatctgg
ctgcaccatctggcgctcaatgccttggagacgccggtttgcccccgctacacccgggtg
cattcgccagaccggcattaccagttgcagccggtggcggacgcccgcggacagctgcaa
cagttgttggactggtactggcggggcttgcgggagccgctgccgtttttccccaaatcc
ggcttcaacctgatggagcagggcgaaccggacatcagccgggtgatgagcacttgggaa
ggcagcggcaatttcagcggggaaagcgaaaagcctgaataccgtttgctttaccggggc
gtcaacccgctggaagggcaggcggacgctttcctggaaatcgccgggtatgtcttcggg
ggtctgttcgccgccagaagcacgctggactga
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