Candidatus Thiothrix singaporensis: HZT40_16180
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Entry
HZT40_16180 CDS
T06729
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
this03009
]
HZT40_16180
Ribosome biogenesis [BR:
this03009
]
Prokaryotic type
ribosomal protein modification factors
HZT40_16180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QLQ32874
UniProt:
A0A7L6AUU4
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Position
3205024..3206748
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AA seq
574 aa
AA seq
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MQEQTFIPGKDAALEISIASMQEKLLNLGFHIEEASWLNPVANVWSVHIRDRDCHLLFTN
GKGASQKAALASALGEXFERLSTNYFWADFYLGETIANSNFVHYPEEKWFPLNNDGSLPE
GLLDEDSLAFYDPDSTLDAAKLVDLNSGNEERGICALPYVRQSDGETVWFPVNVIGNLYV
SNGMSAGNTKTEARTQALSEIFERHIKFRIIAEGICLPDVPEDIIARYPHIQAGIXGLRT
AGFGILVKDASLGGQYPVMCITLLNPEDQGLYASFGAHPRFDVALERSLTELLQGRALDR
LAGFSEPSFDLEDVASPQNLETHFIDSSGXVHWDFLWGEPDYEFADWNFSGDTGXECQYL
MDRIHAEDYAIYIMDYEHLGVYACRIIVPEMSEIYQADDLEWDNNSTGNTVREAILQLPE
LDDEECAELFDAIEEMGLDEHQPIAALIGLXPDPGTLXVDLRVGELKTLLALVMHDEDAI
REGCQWMRHFEQINPDRRRVYRCIETLLDMEDAEGYSPNLEMLYSAPTLQQAQNLLDGSL
RFWGITAPTLDLKGCDMHQRLLAAYRKTHPTLQA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacaaacttttattcccggcaaagatgcagcgctggaaatttcgattgcgtct
atgcaggaaaagctgctcaacctgggtttccatatcgaagaagcctcgtggctgaacccg
gtcgccaatgtctggtcggtgcatatccgcgaccgcgactgccatttattattcaccaat
ggcaaaggcgcatcgcaaaaagctgcattggccagcgcattgggagaattnttcgagcgc
ctcagcaccaattatttctgggcggatttttacctcggcgaaaccattgccaacagtaac
ttcgttcattatccagaggaaaaatggtttcccttgaataacgatggcagtttgccagag
ggattgctcgatgaagatagcctcgccttttacgaccctgactccacgctggacgcggcc
aagctggttgacctgaattccggcaacgaggaacgcggcatctgtgcgctgccttacgtg
cgccagagcgacggcgaaaccgtgtggtttcctgtcaatgtgatcggcaacctctatgtc
agcaatggcatgtccgctggcaataccaagaccgaagcccgcacccaggcactctctgaa
atcttcgaacgccacatcaagttccgcattatcgctgaaggaatctgtctgccggatgta
ccggaagacatcattgcccgttatccacacattcaggctggcattgangggctgcgcacc
gccggttttggcatcctggtgaaagacgcatcgctgggcggacaatacccggtcatgtgc
atcaccttgctcaacccggaagatcaaggcctatacgccagttttggtgcccacccacgt
ttcgacgtggcgttggagcgctccctgaccgaattgctgcaaggccgtgcgttggatcgg
ctggctggtttctccgaacccagtttcgacttggaagatgtggcatcgccgcaaaacctc
gaaacccatttcatcgactccagcggtagngtgcattgggatttcctgtggggcgaaccg
gattatgagtttgccgactggaacttcagcggcgacaccgggcangaatgccaatacctg
atggatcgaatccacgccgaagattacgccatttacatcatggattacgaacacctgggt
gtatacgcctgccgcatcatcgtgccggaaatgtcagaaatctatcaggctgatgacttg
gaatgggacaacaacagcaccggcaacaccgtgcgtgaagccattctgcaactgccagaa
ctggacgatgaggaatgcgctgaattgttcgatgccattgaggagatgggtctggatgag
caccaacccatcgccgcattgattggtctgnngcctgaccctggcacgctgtgngtagat
ttgcgcgtaggcgaacttaaaaccctgctggcactggtgatgcacgatgaagacgccatc
cgcgaaggttgccaatggatgcgccactttgaacaaatcaacccagaccgccgccgcgtc
taccgctgcatcgaaaccctgctggacatggaagatgcagaaggttactcgcccaacctc
gaaatgttgtacagcgcccccaccctccaacaggcgcagaacctgctggacggcagcctg
cgcttttggggaatcactgcaccaacgctggatctgaagggctgcgacatgcaccagcgc
ttgctggcggcctaccgaaaaacgcacccaaccctgcaagcctga
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