Candidatus Thiothrix singaporensis: HZT40_17535
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Entry
HZT40_17535 CDS
T06729
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03030
DNA replication
this03430
Mismatch repair
this03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZT40_17535
03430 Mismatch repair
HZT40_17535
03440 Homologous recombination
HZT40_17535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
this03032
]
HZT40_17535
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_17535
Enzymes [BR:
this01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZT40_17535
DNA replication proteins [BR:
this03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZT40_17535
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZT40_17535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ribosomal_L16
DEDDh_C
ICL
Motif
Other DBs
NCBI-ProteinID:
QLQ33095
UniProt:
A0A7L6AVQ9
LinkDB
All DBs
Position
complement(3470878..3471567)
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AA seq
229 aa
AA seq
DB search
MLWGWFSLEAQKQRLLPKVGHPVARRYLETPFADKKTPVEDLEYLVLDFETTGLDARKDA
ILSMGYTEIRQGRVQMGRCVHRIIKLNITLPPETVVVHKITDDRMSQGIHLHDALHELVE
RMTGKVLIAHFEHIERTFLQAAMARVYGCKMPLQILDTLEIEKRKREQLQQVIIPRQFRL
GNLRQAYNLPRYGAHNALQDAIATAELFLAEMTYIQKESKGIRLTDLLG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggggttggttttcccttgaagcgcagaaacagcgtctgttgccgaaagtaggg
catccggtcgcccgccgttatctggaaacgccatttgcggacaaaaagacaccagtggag
gatttggagtatctggtgctggattttgaaaccaccgggctggatgcgcgtaaagacgcc
atcctcagcatggggtatacggaaatccgccagggtcgggtgcaaatggggagatgtgtc
caccgcattatcaagcttaatatcacgttgccgccggaaacggtggtcgtgcacaagatt
accgatgaccgcatgagccaaggcatccatttgcatgacgccctgcatgagttggtggag
cgtatgaccggcaaggtgctgatcgcacattttgagcatattgagcgcaccttcctgcaa
gccgcaatggcgcgtgtgtacgggtgcaaaatgccgctgcagatattggatacgctggag
attgaaaagcgcaagcgtgaacagcttcagcaggtcattattccccgtcagttccgcttg
ggcaatctgcgccaagcctataacctgccgcgttatggggcgcataacgctttgcaggac
gccattgccaccgctgagttgttccttgctgaaatgacctatatacaaaaggagtcaaaa
gggattagactgactgatttgctaggttaa
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