Candidatus Thiothrix singaporensis: HZT40_19420
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Entry
HZT40_19420 CDS
T06729
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
this03016
]
HZT40_19420
Enzymes [BR:
this01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HZT40_19420
Transfer RNA biogenesis [BR:
this03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HZT40_19420
Prokaryotic type
HZT40_19420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QLQ33409
UniProt:
A0A7L6AW83
LinkDB
All DBs
Position
3842724..3843776
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AA seq
350 aa
AA seq
DB search
MNLLFLGTSSGVPTKSRNVTGIALRASEGKSWCLVDCGEGTQHQLLHTNLSLHTLQAIFI
THVHGDHCYGLPGILASAGMGGRRDPLKVIAPKGIKEWFASTQENTQLFLPFELEFICSD
TLPEVEFQNMRVTITKLSHRVPSYAYSFVERNVGSRXDVEKLRLDGVPQPLWSKIKKGVD
IELDGKTINSNEYLIYDTKPRKIVIAGDNDRPDLLSQACDGSYVLVHEATYTQDMAEKVG
EGVGHSYAKLVAQFAQSIELPHLVLTHFSPRYQSNTEISPSIMDIYMGAKSAYCGGLYMA
GDFSEYKLDKSGEFTQIEGESNSLTKTNGDSLQPAPPARMRKKTCRNACC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactgtttcttgggacgtcgtctggagtccccacaaaatccaggaatgtaaca
ggtattgcattacgggcaagtgagggaaaatcatggtgtttggtggattgtggggagggt
acacaacatcaattgctacacacaaacttgtcgcttcacaccttgcaagcaatatttatc
acgcatgtgcatggggatcattgttatgggttgcctggtatcttggcaagtgcgggaatg
ggcggacgcagagaccctcttaaggtaatagcaccgaaagggataaaagaatggtttgcc
tcaactcaggaaaacacgcaattgtttttgccgtttgagttggagtttatctgttcagat
accttacccgaagtcgaattccaaaacatgagggtgacgattacaaaactatcacatagg
gttccatcgtatgcttatagttttgttgagagaaatgtcgggtcacgtttngatgttgaa
aagttaaggctggacggcgttccccaaccgctttggagcaagataaaaaagggtgttgat
attgagctcgatggtaaaacgataaatagcaacgaatatttaatatacgataccaaaccc
agaaaaatagtgatcgctggagacaatgaccggccagatttgttgtcacaggcctgtgat
ggcagttatgttttggtgcatgaagcaacatacacacaagacatggcagaaaaagtaggt
gagggtgttgggcatagttacgcaaagctggttgcgcagttcgcccaatcaattgaactn
ccccatttggttttgacgcattttagccctcgataccagtcgaatactgaaatctcccca
tccattatggacatttatatgggggcgaaaagtgcttattgtggcggcctttatatggct
ggtgatttttccgaatataaattggataaatcaggcgaatttactcaaattgaaggcgag
agcaacagtttaaccaaaaccaatggcgatagccttcaacctgctccgccagcgcgcatg
aggaagaaaacgtgcaggaacgcttgctgctga
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