KEGG   Candidatus Thiothrix singaporensis: HZT40_19835
Entry
HZT40_19835       CDS       T06729                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
this  Candidatus Thiothrix singaporensis
Pathway
this02020  Two-component system
Brite
KEGG Orthology (KO) [BR:this00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HZT40_19835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:this02022]
    HZT40_19835
Two-component system [BR:this02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   HZT40_19835
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 nSTAND3 bpMoxR AAA_16 Mg_chelatase AAA_22 BRCA2DBD_OB2 TsaE AAA
Other DBs
NCBI-ProteinID: QLQ33473
UniProt: A0A7L6AWS5
LinkDB
Position
3919634..3921016
AA seq 460 aa
MTAQYIMVVDDEPDIRQLVSEILEDEGYRVVTAENADKARELHRSRKPDLILLDIWMPGQ
DGISLLKEWRENDTLCCPVIMMSGHGTIETAVEATKLGAHDFIEKPLSIAKMLLTISNAL
RSSQLEKENRGLRKQMAGSLEPVGGSQTMQRLREQARRIAQHDTRVLLYGEPGAGKEMFA
RYIHSLSNRKHSPFVRAALSASRNASHPLGNLLFGKEDNGKIQYGLLDEANGGALFVAEI
FELDSDSQIRLLNALKENRFMRMGGSEWVDMDITLMVASSHDLQDDVKGGKFNEELYYLL
NVVPLMIPPLREHPEDVPELLNYYVDVLTAQDGLPYRHITLAAQNFLRNHSWPGNIRELR
NLVQRLLILGTDTEVSLDEAEEAVGARIPVFSQEIGHIPESLFDLPLRQAREQFEHDYLI
YQLKQADGNVSKLADQVQMERTHLYRKMRSLNVDPXKYGR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgacagcacaatacatcatggtggtggacgacgaaccggatattcgccaactggtcagt
gagatccttgaagatgagggctaccgggtcgtcacggctgaaaatgcagacaaagcccgc
gaattgcaccgcagccgcaagcctgacctgatcttgttggacatctggatgccagggcag
gacggcatttccctgctcaaggaatggcgcgaaaacgacaccctgtgctgcccggtcatc
atgatgtcggggcatggcaccatcgaaaccgccgtcgaggccaccaagcttggcgcacat
gatttcatcgaaaaaccgctgtcgatagccaagatgttgctgaccatcagcaacgccctg
cgctccagccagttggaaaaggaaaaccgtggcctgcgcaaacaaatggcagggtcgctg
gagccggtcggcggcagccagaccatgcagcgcctgcgtgaacaggcgcgccgcatcgcc
cagcatgacacccgtgtcttgctgtatggcgagcctggcgctggcaaggaaatgttcgcc
cgctacatccactccctcagcaaccgcaaacacagcccctttgtgcgcgcggcnctgtcc
gccagccgcaacgcctcccatccgttgggcaacctgctgtttggcaaggaggacaatggc
aaaatccagtacggcctgctggacgaagccaatggcggtgccttgttcgtggcggaaatc
ttcgagctggacagcgacagccagatccgcctgttgaatgcgctcaaggaaaaccgtttc
atgcgcatgggcggcagcgaatgggtggacatggacatcaccctgatggtggcgtcctcc
catgacctgcaggatgatgtcaaaggtggcaagttcaacgaggagctttattacctgctg
aacgtggtgccgttgatgatcccgccgttgcgcgaacacccggaagacgtgccggaactg
ctgaattactatgtcgatgtgctgacggcgcaagatggcctgccataccggcacatcacg
ctggcggcgcagaatttcctgcgcaaccacagctggccnggcaacatccgtgaactgcgc
aacttggtgcagcgcttgctgatcctcggcaccgacaccgaagtgtcgctcgatgaggcc
gaagaggcggtcggcgcgcgcatcccggtcttttcgcaggaaatcggccatatcccggaa
agcctgttcgacctgccgctgcggcaggcgcgtgagcaatttgaacacgactacctgatt
taccagctcaaacaggcggatggcaatgtcagcaagctggctgaccaagtgcagatggag
cgcacccacttgtaccgcaagatgcgttccctcaacgtcgacccgaanaaatacggacgt
taa

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