KEGG   Candidatus Thiothrix singaporensis: HZT40_20390
Entry
HZT40_20390       CDS       T06729                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
this  Candidatus Thiothrix singaporensis
Pathway
this03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:this00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HZT40_20390 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:this02044]
    HZT40_20390 (tssH)
Secretion system [BR:this02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HZT40_20390 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 NBD_SMAX1 Clp_N TniB Zeta_toxin AAA_7 Sigma54_activat ATPase_2 nSTAND6 NACHT DUF815
Other DBs
NCBI-ProteinID: QLQ33563
UniProt: A0A7L6AX08
LinkDB
Position
complement(4038353..4041097)
AA seq 914 aa
MSEISRAALFRKLNPLTYKAIESATVXCKLRGNPYVELAHWLHQIMQLQDSDLHRLVQAF
SXNIAHLSRDMTAALDKLPRGATSITDLSAHVEEAVERGWVYGTLMYGDSSVRTAYLLVG
LLKTRELRNELYALSAEFQKIGIDKLTDELMQLIAGSPEDGMAATDGSRLXDAQPGEASG
ALAPAQMGKQEALKQFTVDLTEQARSSKLDPIVGRDREIRQMIDILMRRRQNNPILTGEA
GVGKTAVVEGFAQRIVSGDVPPSLKDVSIRTLDLGLLQAGASMKGEFENRLKQIIEEVQS
SAQPIILFIDEAHTLIGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKYFEKDPA
LTRRFQVVQVEEPSEEAAVLMLRSMASVMEQHHKVSLLDEALEEAVKLSHRYIPARQLPD
KAVSVLDTASARVAVSQHATPPEVEDCQKRIQALQVELGIIGREAAVGLDVAERKTVAET
RLTEETTRLQTLEQRWQGERELVGRILELRQKLRDISGKVEGTGSKLEQAADAVMGQAAT
PQPSEDAQSDRETLLTELRGLQAQLGELQGEAPLILPVVDGQAVAAVIAGXTGIPVGRMV
RNEIAAVLKLGDRLNERVVGQRHALDMIARRIQTTRARLDNPDKPIGVFMLCGSSGVGKT
ETGLALAEALYGGEENIITINMSEFQEAHTVSTLKGSPPGYVGYGEGGILTEAVRRRPYS
VVLLDEIEKAHADVHEIFFQVFDKGWMEDAEGRYIDFRNTLILLTTNVGTELIMSMCADP
ELMPASEGLAKALREPLLKVFPPALLGRLVIIPYYPLGDEILHTIIRLKLDKIARRVKQN
HGSKFVYGDDVVQLIAARCNDVDSGARVVDAILTNTVLPAISEEFLGRMLEGKRMGDVTV
TVAAGNFNYAFAGE
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgtccgagatcagccgggcggcgctgttcaggaaactgaacccgctgacctacaaagcc
atcgagagcgccaccgttntttgcaagctgcgggggaatccttacgtcgaactggcgcat
tggctgcaccagatcatgcagttgcaggactccgacctgcatcggctggtgcaggcgttt
tccntcaatatcgctcacctgagccgcgacatgacggcggcgctggacaagctgccgcgt
ggcgcgacctccatcaccgacctgtcggcgcatgtggaggaagcggtggaacgcggctgg
gtgtacggcacgctgatgtatggcgacagttcggtgcgtactgcctatttgctggtgggg
ctgctcaagacgcgcgaattgcgcaatgagctgtatgcgctgtcggctgaattccagaaa
atcggcatcgacaagctcaccgatgaactgatgcaactgatcgccggttcgccggaagac
ggcatggccgccaccgacggctcccgtctgngggatgcgcaaccgggcgaagccagcggc
gcgctcgcccccgcacagatgggcaaacaggaagcgctcaagcaattcaccgtggatctg
accgaacaggcgcgcagcagcaagcttgacccgattgtggggcgtgaccgcgaaatccgc
cagatgatcgacatcctgatgcgccgccgccagaacaacccaatcctgaccggggaagcc
ggggtgggcaaaaccgccgtggtggaaggcttcgcccagcggattgtctccggcgacgtg
ccgccttcactgaaggatgtttctatccgcaccctcgacctgggcttgttacaggccgga
gccagcatgaagggcgagtttgaaaaccgcctgaaacagatcattgaggaagtccaatcc
tccgcccaacccattatcctgttcattgacgaagcccacaccctgattggcgcaggcggg
gctgctggtaccggggatgctgccaacctgctgaaaccggcgctggcgcgtggcactttg
cgcaccgtagccgccaccacctgggcggaatacaagaaatatttcgaaaaagacccggca
ctgacccgccgtttccaggtggtgcaggtggaggagccgagcgaggaagctgccgtgctg
atgttgcgcagcatggcctccgtcatggagcagcaccacaaggtgtcgctgctggacgaa
gcgctggaggaagccgtcaagctttcgcaccgctacattcccgcccgccagttgccggac
aaggcggtcagcgtgctggacaccgccagcgcacgggttgcggtcagccagcacgccacc
ccgccggaagtggaggattgccagaagcggatacaggctttgcaggtggaactcggcatt
atcggccgtgaagccgccgtcgggctggatgtcgccgagcgcaagactgttgccgaaact
cggctgacggaagaaaccacacgtttgcaaaccctggagcaacgctggcagggcgaacgc
gaactggtcggcaggatactggaattgcgccagaaactacgggacatttccggcaaggtg
gaaggaacaggttcaaaactcgaacaggccgccgacgctgtgatggggcaggcagctaca
ccgcaaccgtcggaggatgcgcagtctgaccgcgaaaccctgctgacggaattgcggggt
ttgcaagcgcaactgggtgaattgcaaggggaagcgccgttgatcctgccggtggtggat
ggtcaggcagtagccgccgttatcgctggcntgaccggcatcccggtcgggcggatggtg
cgtaatgaaattgctgccgtccttaaactcggcgaccgcctgaacgaacgggtggtcggc
cagcgtcatgccctcgacatgatcgcccgccgtatccagactacccgtgcgcggctggac
aaccctgacaaaccgattggtgtgttcatgttgtgcggctcgtccggggtgggcaagacc
gaaaccgggctggctctggccgaagcgctgtatggtggcgaggaaaacatcatcaccatc
aatatgagcgaattccaggaggcgcacaccgtttccaccctgaaaggttcgccgcccggc
tatgtcggctacggggaaggcggcatcctgaccgaagcggtgcgccgccgcccctacagc
gtggtgctgctggatgaaatcgaaaaggcgcatgccgatgtgcacgaaattttctttcag
gtgttcgacaagggctggatggaggatgcggaaggccgctatatcgatttccgcaatacc
ctgatcctgctgaccaccaatgtgggcacggaactgatcatgagcatgtgcgctgacccg
gaactgatgccagccagcgaagggctggccaaggccttgcgagagcctttgctgaaagtg
tttccgcctgcgctgttggggcggctggtgattatcccgtattacccattgggtgatgaa
atcctgcacaccatcatccgcctgaaactcgacaagatcgcccgccgggtcaagcaaaac
cacggctcgaagtttgtgtatggggatgatgtcgtccagctgatcgccgcccgttgcaac
gacgtggatagcggcgcacgggtggtggatgcgattctgaccaataccgtgctgcccgcc
atcagtgaggaattcctcggcaggatgctggaaggcaagcgcatgggcgatgtcacggtg
accgtcgcagcgggcaatttcaactatgcatttgcgggggaataa

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