Candidatus Thiothrix singaporensis: HZT40_21840
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Entry
HZT40_21840 CDS
T06729
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZT40_21840 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_21840 (priA)
Enzymes [BR:
this01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZT40_21840 (priA)
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZT40_21840 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_22
PIF1
Motif
Other DBs
NCBI-ProteinID:
QLQ33816
UniProt:
A0A7L6AXE6
LinkDB
All DBs
Position
complement(4310633..4312675)
Genome browser
AA seq
680 aa
AA seq
DB search
MSQNPRTAQIAVPRPLHTLLSYLLPAGQQPLAGTRVLAPLGKQQTVGLIIHTEQMPVSGS
EFELKPVTEILDPSPLPDPHLLELQQXEAARYYHHPIGEVIFSTLPAALRKPKPLSSRAQ
KLLLPPTTAATSAGQAIPGDGFSLTQEQQHCLHSIQQWNLAPKPPPTLLHGITGSGKTEI
YLRLIAPLLAAGKQTLVIVPEIGLTPQLLLRFQRFFGAIPIACLHSGLSDGERLKAWLQA
RNGQAQIIIGTRSAIFASVPNLALIVIDEEHDASLKQQEGFRYHARDLAIKRAQMLNIPV
VLGSATXSLESLYNAQSGRFHYIHLGQRPGSTLTPTLQIQDTRPFELQAXLTPISLQAIH
QTLARGEQAMVFLNRRGFAPALYCPACGWQAVCNHCSVNLTWHARRNRLVCHHCGAEQAT
PTHCPTCRHSGITTQGQGTERLELNLQSSFPEFPVVRIDRDSTSRKGELEGKLATVRSNE
PLVLVGTQMLAKGHDFPNLTLVVILDIDQSLLSTDYRALERLGQLLVQVAGRAGRAEKPG
RVILQTTQPDNPLLRQLVGHGYTPFAKQLLEDRKRWRFPXFGHQALLRASSTASMEKALK
FLEHISQLLASAEMTGVQRLGXIPAPVEKRANRYRAQLLLGSEQRAQLHLALRQLLRQEH
SLPGRSGIRWSIDVDPVELS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaccctcgtaccgcgcaaattgccgtcccacgccccttgcacaccctactc
agctacctcctccccgcagggcaacagcccttggcaggcacgcgcgtactggctccgcta
ggaaagcaacaaacggtcggcctgatcatccacacagagcaaatgccagtatcagggagc
gaattcgaactcaaacctgtgacggaaatccttgacccatcacctttgccagacccacac
ctgctggaattgcagcaatnngaagccgcccgttattaccatcacccaattggcgaagtc
attttcagcacgttgcccgccgccctgcgcaaacccaaacccttgtcctcacgggcgcag
aaactgttgcttccgccgacgacagcagccaccagcgcagggcaagccataccgggcgat
ggcttttcccttacccaggaacaacagcactgtctgcacagtatccagcaatggaacctc
gccccaaaaccgcccccgaccctcttgcatggcattaccggcagcggcaaaacagaaatt
tacctgcgcctgatcgccccgttgctggccgcaggaaaacagacgctggtgatcgtgccg
gaaatcggcctgacgccccagttgctgctgcgcttccaacggtttttcggtgccatcccg
attgcctgcctgcactccggcctcagcgatggcgaacgcctcaaggcttggctacaggcg
cgcaacgggcaagcgcaaatcattatcggcacacgttcagccatctttgcatccgtgcca
aatctggcgctgatcgtcattgacgaggagcacgacgcctccctcaagcaacaggaaggc
ttccgttaccatgcccgtgatctcgccatcaaacgggcgcaaatgctcaatattcccgtt
gtcctgggcagtgccaccncctcgctggagtcgctgtacaacgcgcaaagcggccgcttc
cattatatccaccttggccagcgccccggctcgacgctcacacccaccctgcaaattcag
gacacgcgcccgttcgagctgcaagcgngcctgacccccatcagcctgcaagccatccac
cagaccctggcgcgcggcgagcaagcgatggtgttcctcaaccggcgtggttttgctccg
gcactatattgccccgcttgtggctggcaagccgtctgcaaccattgcagcgtcaacctt
acctggcacgcccgccgcaaccgtttggtctgccaccactgcggcgcggaacaggccacg
ccgacacattgccctacctgccgccactcagggatcaccactcaggggcaaggcactgag
cggctggaactgaacctccaatccagcttcccggaatttccagtggtgcgtatcgaccgg
gacagcaccagccgtaaaggggaacttgaaggcaaacttgccaccgtgcgcagcaatgag
cccctggtgctggtcggcacccaaatgctggctaaaggccatgattttcccaacctgacc
ttggtcgtgatcctcgacattgaccaatcactgctcagtaccgactaccgcgccttggag
cgcctcggccagttgctggtgcaagtagcaggccgtgccggacgggcggaaaaaccaggc
agggtcatcctgcaaaccacccagcctgataacccgttgctgcgtcaattggtagggcat
ggctacacacccttcgccaaacaactgttggaagaccgcaaacgctggcgttttcccncg
ttcggccatcaggcgttgctccgcgccagcagcacagccagtatggagaaagccttgaaa
ttcctggaacacatcagccaactactggcctcggctgaaatgaccggcgtacaacggcta
ggcncaatacctgcaccagtagaaaaacgcgccaaccgctaccgcgcccaattattgtta
ggcagcgaacaacgggcgcagctgcatcttgcgctgcgtcaactgttgcggcaggaacac
agcctaccgggacgttccggcatacgctggtccattgatgtcgatccagtcgagttgagc
tag
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