Candidatus Thiothrix singaporensis: HZT40_22605
Help
Entry
HZT40_22605 CDS
T06729
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HZT40_22605 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_22605 (ruvB)
Enzymes [BR:
this01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HZT40_22605 (ruvB)
DNA repair and recombination proteins [BR:
this03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZT40_22605 (ruvB)
RecFOR pathway proteins
HZT40_22605 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
nSTAND3
AAA_2
TIP49
Bac_DnaA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QLQ34343
UniProt:
A0A7L6AZ90
LinkDB
All DBs
Position
complement(4442860..4443924)
Genome browser
AA seq
354 aa
AA seq
DB search
MDKQDSRVISPQSLREEDRTDENIRPRRLQDYIGQPVVREQMEIFIHAARHRGDALDHVL
IFSXPGLGKTTLSHIIAHEMGANLRQTSGXVLEKAGDLAALLTNLEPHDVLFIDEIHRLS
PMVEEILYPAMEDFQLDIMIGEACGRSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIIQR
LEFYNEQDLAFIVMRASGIIGAKIDPDGAHEIARRSRGTXRIANRLLRRVRDYAQVKSDG
VISSEIADKALNMLNVDHQGFDHMDRRLLLAIMDKFDGGXVGVDSLAAAIGEERGTIEDV
LEPFLIQQGYLMRTXRGRVATRXAWQHFGLNMPNTIESITGDDDTEGKNLELFE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaagattcccgcgtcatttctccacaatccctacgtgaagaagatcggact
gatgaaaatattcgcccacgaaggttacaagactatataggccagcctgttgtgcgggaa
cagatggaaatcttcatccatgcagcccgtcatcgcggcgacgcattggatcatgtcctc
atctttagcncacctgggttagggaaaacaaccctttcccatattatagcccatgaaatg
ggagccaacctacgccagacctcaggcnccgtgttggaaaaggctggtgatcttgccgcc
ttgctgaccaacttggagcctcacgacgtactttttattgatgagatccatcgactcagc
ccgatggtggaagaaatcctgtacccggcgatggaagatttccaactggacatcatgatt
ggtgaagcctgcggccgctccatcaaacttgacctcccacccttcacactcgtgggtgcc
acgacccgcgccggtttgcttacctcaccactacgcgaccgtttcggcatcatccaacgg
ttggagttctacaacgaacaagatcttgccttcattgtcatgcgtgcgtccggcattatc
ggcgctaaaatcgaccctgacggcgcacatgaaatcgcccgccgttcacgcggcaccncc
agaatagccaaccgcctgctgcgccgggtgcgtgattacgcccaagtcaaaagtgatggc
gtcatcagttccgaaattgcggacaaagccctcaatatgctgaatgtcgaccaccagggg
ttcgaccacatggacaggcggttgctgctggcgatcatggacaagtttgacggcggcnca
gtcggcgtggatagcctagcggccgcaatcggcgaagaacgcggcaccatcgaagatgtg
ttggaaccgttcctaatccagcaaggctatttgatgcgcaccncccgcggacgggtcgcc
acccgcnaggcctggcagcatttcgggctgaacatgccaaacacaattgaatccatcacc
ggcgacgatgacacggaaggcaaaaaccttgagctgttcgaatga
DBGET
integrated database retrieval system
