KEGG   Candidatus Thiothrix singaporensis: HZT40_22945
Entry
HZT40_22945       CDS       T06729                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
this  Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:this00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:this02044]
    HZT40_22945 (sctD)
Secretion system [BR:this02044]
 Type III secretion system
  Type III secretion core apparatus
   HZT40_22945 (sctD)
SSDB
Motif
Pfam: Yop-YscD_cpl Y4YQ_C Yop-YscD_ppl_1st Yop-YscD_ppl_2nd Yop-YscD_ppl_3rd FHA T3SS_needle_E HrpD6 T2SSC T2SSB
Other DBs
NCBI-ProteinID: QLQ34004
UniProt: A0A7L6AXT3
LinkDB
Position
4511291..4512853
AA seq 520 aa
MAVQHTSFILKVLNGFNAGAVVRLKTGSLVIGSSMNSDIILHDENIADQHVQLLITPSSI
TLQPLARPVFVDGAEMAEESVDLLAFQTVRLGKVEFQVTDARMATTKSVTESTAVSRAAN
PKKQAADKAESPTGQKKMKTMPVKPPAKAGWSGRVWLMLGLGLLLLANLIYWAPQFNRLL
ENFGMLAPAEKRAATLMDELGQRDFKLINETDGSVSVEGYTHSAEERNELLSRIQGANIN
TRLRIWAQDEMVDNATMICRAXGEPKVVIKPGKAGGELVAEGFVSKATAWDQVRASILND
VGGVRSVADETLQSMDSYLASFVQLIEXKGLSSRIQATTDGKKVIVNGELTQLEIEKLKA
MRDEFLDVHKNGLAIVLEVTDVRNRIRLAIRSVSVGKVPFLVAKDGKKYMEGSALGENYF
VKSIKPDHVVLTNNGVDIPFYYGIEEKIMAMLFIEQNLQDDTSGIYKADLLDKFNQAASE
VRSELNQGVTPVEYERLNKFLMALEASCEVVEQFWTQAHQ
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcagtccagcacacgtctttcattctaaaagtattaaacgggttcaatgccggtgcc
gttgtcaggttaaaaacaggcagcctggtcattggaagctccatgaatagcgacattatt
ttgcatgatgagaatattgcagaccaacatgtccagttgttgattacaccaagcagcatc
acacttcagccattggcgcgtcccgtatttgttgatggggcggaaatggcggaggaaagt
gtggatttactggcgttccagacagtcaggctgggtaaagttgagtttcaggtgactgac
gccagaatggcaaccaccaaatccgtaacagaaagcactgcggtttccagagctgccaac
cctaaaaagcaggcggccgataaagctgaatcgcctacaggacagaaaaagatgaagaca
atgcctgtcaagccgccagcgaaggccggttggagcgggcgggtttggttgatgcttggg
ttggggctgctgttgcttgctaacttgatttactgggcacctcagttcaatcgattgctg
gagaattttgggatgttggcgccagcagagaaacgagccgccacattgatggatgagctg
ggacagcgggactttaagctgataaatgagacagacggctcagtcagtgtggagggttat
acccattcagcggaagaacgcaatgagctgttgagcaggattcaaggggcgaacatcaac
actaggctgcgtatttgggcacaggatgagatggtggataacgccactatgatttgtcgt
gcgatnggggagccaaaggttgtgatcaagccnggtaaggctggcggggagctggttgca
gagggctttgtcagtaaagcgacagcctgggatcaggttcgtgcaagtatcttgaatgat
gtgggcggcgtgcgcagtgtggcggatgaaaccctgcaatcaatggatagttatttggcg
agctttgtgcagctcatcgagaanaaagggctttccagccgtatccaagccactactgac
ggaaagaaagttatagtcaatggcgaacttacccagctggaaattgaaaagttaaaggcc
atgcgggatgagtttcttgatgttcataaaaatggnctggcaattgtncttgaagtaact
gatgtacgtaaccgtattaggttagccattaggagcgtgagcgtcggtaaagtgccattt
ctggtagccaaggatggnaaaaaatatatggaaggctcggcactgggtgaaaattatttc
gtcaaatccatcaagcctgatcatgtggtgttaacgaataacggggtggatatacccttt
tattatggcattgaggaaaaaataatggcaatgttgttcattgaacaaaatcttcaggat
gatacatcaggaatatacaaagctgaccttcttgataagttcaatcaagcggcgtcggaa
gtgcgttctgagctaaatcagggtgtgactcctgttgagtatgagcggttgaataaattc
ttgatggcattggaagcaagttgcgaggttgttgagcagttttggacgcaggctcatcag
tag

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