Tarenaya hassleriana (spider flower): 104798394
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Entry
104798394 CDS
T04125
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4-like
KO
K10609
cullin 4
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03420
Nucleotide excision repair
thj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104798394
09124 Replication and repair
03420 Nucleotide excision repair
104798394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104798394
03400 DNA repair and recombination proteins [BR:
thj03400
]
104798394
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thj04147
]
104798394
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104798394
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104798394
TCR (transcription coupled repair) factors
Cul4-CSA complex
104798394
Exosome [BR:
thj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104798394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HbrB
Motif
Other DBs
NCBI-GeneID:
104798394
NCBI-ProteinID:
XP_010518764
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSLPTKRSTCSTASASAAAAAGSSASPPPMKKAKNGLHHHDKEVFPMDEDPAPAASAAAN
LSRKKSTPPQPAKKLVIKLNKAKPILPTNFEETTWAKLQSAIRAIFKKEAVSFDLEGLYQ
AVDNLCLHKMEGKLYQQIEKECEDHISAALLSLVGKSTDLSGFLSVVKNCWLDFSDQMLM
IRSIALSLDRKYVIQNPNVRSLWEMGLQLFRKHLSLASEVEQRIVNGLLRMIENERLGEA
VDRTLLSKLLKMFTSLGIYVESFEKPFLECTSEFYAAEGMKYTQQSDVPEYLKHVEGRLH
EENERCILYLDAGTKKTLIATTERQLLERHISAILDKGFTALMDGRRTEDLQRMYILFSR
VNTLESLRQALSSYIRKTGQRIVMDEEKDKDMVPTLLELKASLDAIWEESFSKNESFGNT
IKDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELENTLEKVLVLFRFIQGKDVF
EAFYKKDLAKXGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKTSQ
QARSKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELIVYQDIFKEFYLSKYSGRRLMWQN
SLGHCVLKADFPKGKKELAVSLFQAVVLMLFNDAHKLSFQDIKDSTSIEDKELRRTLQSL
ACGKVRVLSKVPKGRDVEDGDEFVFNDGFTAPLFRIKVNAIQMKETVEENTSTTERVFQD
RQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKTN
PQIYNYLA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcccaccaaacgctctacttgctccactgcttctgcctccgctgctgccgcc
gccggttcctccgcctctcccccgccgatgaagaaggccaagaacggtctccaccaccac
gacaaggaagtcttccccatggacgaagatcccgctcccgccgcctccgccgcggccaat
ctatcccgcaagaagtccactccgccgcagccggctaagaagctcgtcatcaagctcaac
aaagctaaaccaatactacccacaaactttgaggagactacatgggcaaagctgcaatca
gctatcagagctatattcaagaaggaagcagtgtcttttgaccttgaagggctttaccag
gctgttgataacctttgcctacataagatggaaggaaaactttaccaacagatagagaag
gagtgtgaagaccacatttctgccgctttactgtctttagttgggaaaagcaccgacctg
tctggtttcttgtcagtcgtcaagaattgttggttagacttttcagaccagatgctaatg
atccgtagtatagctttgtcactggacagaaaatatgtaatacaaaaccccaatgtacgt
tcgttgtgggaaatgggtctgcagcttttccggaaacatctctccctggcctctgaagtt
gaacagcggattgttaatggtcttttaagaatgattgaaaatgaaagattaggtgaagct
gttgataggactctgttaagcaaacttctaaagatgtttacctcgcttggaatatatgtg
gaaagctttgagaaacctttccttgaatgcacttctgaattttatgctgccgaaggaatg
aaatacactcagcagtctgacgtccctgagtacttgaagcatgttgagggaaggttgcat
gaggagaatgaaagatgcatactatacttggatgcaggtaccaagaaaacactgatagca
actacggagaggcaacttcttgagcgtcacatatctgctattcttgataaggggtttaca
gcactgatggatggacgtcgtacagaagatctacagaggatgtacatactgttctctagg
gtgaacacactcgaatctttaagacaggcactaagctcctacattcgaaaaactgggcag
aggatcgtcatggatgaagagaaagataaggatatggtaccaacattgttggagttaaag
gcttctcttgacgcaatatgggaagagagcttttccaagaatgaatcatttggcaatacc
attaaagactcatttgagcatctgattaacctacgccagaatcggcctgctgagcttatt
gccaagtttttggatgagaagcttcgtgctgggaataagggtacttccgaagaagaattg
gagaatacgctggaaaaagtcttggttttgttcagatttatccagggtaaagatgtgttt
gaagcattctacaaaaaagatcttgcaaagnnaggaaagagtgcttcaattgatgctgag
aaatccatgatctctaagcttaagactgagtgtggaagccagtttacaaacaagctcgaa
ggcatgttcaaggatattgaactgtcaaaagaaataaatgagtcattcaaaacatcacaa
caagccaggtcaaaactgccatcaggaattgagatgagtgttcacgtcttaacgacaggg
tattggcctacatatccacctatggatgttaagcttcctcatgaactaattgtctaccag
gacatcttcaaagagttctatttgagcaagtacagcggcaggagattaatgtggcaaaac
tcattaggtcactgtgtactaaaggcagatttccctaaaggtaaaaaggagcttgcggtt
tcactgtttcaggctgttgtcttgatgttgtttaacgatgcacacaaacttagctttcaa
gacattaaagattcaacaagcatagaggacaaggaactgagaaggacgttgcaatcactt
gcatgtgggaaagttcgtgtcctgtcgaaggttccaaaaggaagagacgtagaggatggt
gatgaatttgttttcaatgatggatttacagcccctctgtttcgaattaaggtgaatgcc
atccagatgaaagagactgtagaggagaacacgagtaccacggaaagagtattccaggac
cggcaataccagatcgatgcggccattgtgcggataatgaagacgaggaaggtgttgagc
catactcttctaatcacagagctcttccaacagctgaagttcccaataaagccggcagat
ctgaagaagaggatagagagcctcatcgacagggagtacctggaaagggacaagaccaac
cctcagatttacaattacctcgcttag
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integrated database retrieval system
