Tarenaya hassleriana (spider flower): 104798861
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Entry
104798861 CDS
T04125
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104798861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104798861
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
RNases
104798861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
phiKZ_IP
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
104798861
NCBI-ProteinID:
XP_010519376
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MASSKRKRDAIASEEDNLNGAESGGGSDKSIAGNSFFDIYGPDAKAEIEFKQPESTLNLQ
DVQGLVTWVLAEGYMPSWAFIKNKPLIPKVVLLYLPGLDAALYLSQSKLLSSFKTCLGRP
RPLLALSCVLDEMKTIDAILTCKVKRKRNISGSEEKHLQASEPEPCNAMQIFSFTELTKD
IPFPITYYTLSRKEMENNGYILDKPGSNQLPVNFSSTDFFPTLPAPSGSSPHEILALDCE
MCITKEGFELTRVTLADVRGQVLLDKLVKPSNPITDYNTTFSGITAEMMEGVTTTLKDIQ
EEFLKLVSKETILVGHSLENDLFSLKISHDMVIDTAVLYKHPRCGSFKTKLRVLAKKFLS
REIQVYGNGHDSIEDARAAMDLALLKIRHGPDFGSPPEMVRKRLLTVLSESGKTTSIIDN
INIVKRFASESSNSIPVSSDDEAISKAVKETKNNRSQFIWTQFSELNAHFQRKADNSEKL
NTRLAELISLLTCNDKSNPKKSRKSSVSSETKEILKRMDARVHALYTALPTNAMFIVCTG
HGDTAIVHRVRKMLREQKETELCREKIVKVLEELQAQAEVALCFVGIKK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcgaagcggaagcgcgacgcgatagcctcggaggaagataacctaaacggc
gcagaaagtggcggtggtagtgataagagcatcgccggcaacagtttcttcgatatctat
ggacctgatgctaaagcggagattgagttcaaacagccggaatcgacgttgaatctacaa
gacgttcagggacttgtgacttgggttcttgctgaagggtatatgccatcatgggcattt
atcaagaacaagcctctcattccaaaggttgtcctgctctaccttcctggattggacgcg
gctttgtatttatcacagtctaaattactttccagtttcaaaacatgtcttggcagacct
agaccccttttagctttgagttgtgtattagatgagatgaagacaatcgatgctatcctc
acgtgcaaggttaaaaggaagagaaatatttctggttcagaagaaaaacatctccaagca
tctgagccagaaccatgcaatgctatgcagattttttcctttacggaactcacaaaggat
ataccttttcctatcacgtactatactttaagtcgaaaggaaatggaaaacaatggatac
attcttgataaaccagggtcaaatcaattaccggttaacttttcatctacagattttttc
cctactcttcctgcgccatcagggtcctctccccatgagattttggctcttgactgtgag
atgtgtattacaaaggaaggctttgagttgacaagggtgacgttggcagatgtcagagga
caggttctattagataaactagtcaagccatcaaatcccattactgattataacacaacg
tttagcggaataacagctgagatgatggagggagtgactacaactcttaaagatattcag
gaagagtttttgaagctggtttccaaagagacgatcttagttggacactccttggaaaat
gacttgttttctctgaagatctctcatgatatggtgattgacactgcggtactatacaag
catccccgctgtgggtccttcaaaactaagctgcgggttttagcaaaaaagtttctttct
agagagatacaagtgtatggaaatggtcacgacagcattgaggacgcaagagctgccatg
gatttggcactcttgaagataagacatggacctgattttggttcgccaccagaaatggta
cggaaaaggctcctcactgttttgtctgaaagcgggaaaaccacttctatcattgacaat
attaacattgtaaaacgatttgcttctgagtcatcaaactcaattccagtttcttctgat
gacgaagcaatttcaaaggccgtcaaggagacgaagaacaacaggtcgcaattcatttgg
acccagttctcagaactgaatgcccatttccagagaaaggcggataattcagagaaacta
aacacaagattagcggagttaatctcgttactcacgtgtaacgacaaatctaaccccaag
aaaagccgcaaaagcagtgtttcgtctgagacaaaggaaatcttgaaacgaatggacgct
agagtccatgccctttacactgcattacccacaaatgccatgtttattgtctgcaccgga
catggagacacagctattgtgcacagagtacggaaaatgctgagagaacagaaggaaacc
gagctttgccgggagaagatcgtgaaggttctagaagaacttcaagcacaagctgaggta
gctctctgttttgtaggcatcaagaaatga
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