Tarenaya hassleriana (spider flower): 104798874
Help
Entry
104798874 CDS
T04125
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104798874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104798874
03019 Messenger RNA biogenesis [BR:
thj03019
]
104798874
Transcription machinery [BR:
thj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104798874
RNA polymerase I system
104798874
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
104798874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
KOW4_SPT5
Spt5-NGN
KOW7_SPT5
KOW6_SPT51-2
KOW2_Spt5
KOWx_SPT5
KOW5_SPT5
Spt5_N
GPKOW_C
SH3_KIN17_C
DUF4438
ProQ_C
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
104798874
NCBI-ProteinID:
XP_010519395
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MARHRDDDEYVDEYDEEDAAAELDEEEEEEEERGGRGGSSRRKRTRSGFIDDYAEEDSEE
EEDEDDDYGGRGARGNKKKKKTSASIFLDEEAQVDDDEEEEEEEGEDDFIVDGGADIPDE
GVGRRLHDRRFLSREENEEDVEDLERRIQERYSRHHAEYDEEATDVEQQALLPSVRDPKL
WMVKCVIGREREVAVCLMQKFIDRGSDLPIRSVIALDHLKNYIYVEADKEAHVKEAIKGM
RNIYHSQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRV
TVKLIPRVDMQALANKLEGREVAKKKAFVPPPRFMNIDEARELHIPVERRRDPITGEYFE
NIGGMQFKDGFLYKTVSMKSITAQNVTPSFDELEKFNKPSENGESDIASLSTLFANRKKG
HFMKGDAVVVIRGDLKNLKGWVEKVDEENVHIRPEMKGLPKTIALNERDLCKYFEPGNHV
KVVSGTHEGATGMVIKVDQHVLIILSDTTKEDVRVFADHVVESSEVTTGATKIGDYEIHD
LVLLDNLSFGVIIRLESEAFQVLKGVAERPEIVLVKLREIKCKIERKSDAQDRYKNTVSV
KDVVRVIEGPSKGKQGPVMHIYKGILFINDRHHLEHAGFICAKCTSCVVVGAPRPGTDRN
GDSMSRFGTFKTPAPVPQSPRRSQRGGMGYNSGGRHRGGRGGHDALVGTTVKIRLGPHKG
YRGRVVEVKGPSVRVELESQMRVVIVDRNAISDNVVVTPMRDTSRYGMGSETPMHPSRTP
LHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPHRDSNWEEGNPASWGTSPQYQPG
SPPSRAYEAPTPGSGWASTPSGSYSDAGTPRDNSSAYANAPSPYLPSTHGQPMTPNSASY
LPRTPGGQPMTPGTGLDVMSPVIGGDAEAWFMPDILVEVHKAGEDTDVGVIRDVLPDGSC
KVAMGSGGEGEAVLALPNEMEIVPPRKNDRVKIVGGSYRGSTGKLIGVDGSDGIVRLDDS
LDVKILDLALLAKLAI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcacagagacgatgatgaatatgttgatgagtacgatgaagaggacgctgcg
gcggagttagacgaggaggaggaggaagaggaggagcgaggaggccgaggaggaagttcg
aggcggaagcggacgagatcgggtttcatcgatgactatgcggaggaggattccgaggag
gaggaagatgaagatgatgattatggaggtcgtggagcaaggggaaataagaagaagaag
aagacttcggcttccatatttttggatgaagaggcccaggtggatgacgatgaggaagag
gaagaagaagaaggagaggatgatttcatagtggatggtggagccgacatacctgatgaa
ggtgttggtagacgacttcatgatcgtaggtttctttctcgtgaagaaaacgaagaggat
gttgaagatcttgaaaggaggattcaagagaggtattctaggcatcatgcggaatatgat
gaggaggccactgatgttgagcaacaggctcttttgccgtcggtccgtgatccgaaattg
tggatggtgaaatgtgtgattggccgtgaaagggaggttgctgtttgtcttatgcaaaaa
ttcattgatagaggatcagatttgccgatcaggtctgttattgcacttgatcatctgaaa
aactatatatatgttgaagcagataaagaagctcatgtgaaagaggccatcaagggaatg
cggaatatttatcatagtcaaaagattttacttgttcctataagagaaatgacggatgtt
ctctctgttgaaagcaaagcaattgatctatcacgagatacctgggttagaatgaagatt
ggaacatataaaggggatcttgctaaggttgttgatgtagataatgtgcgtcagagggtc
acggtgaagttgatcccgagggtcgatatgcaggctctggctaataagttggaagggaga
gaagttgcaaagaaaaaagcctttgttccacctccccgtttcatgaatattgatgaggcg
agggaattgcacattcctgtcgagcgccggagggatccaattactggcgaatacttcgaa
aatattggtggcatgcaattcaaagatggtttcctgtacaaaacagtgtcgatgaagtca
ataactgcccagaatgttacaccgagttttgatgagcttgaaaaattcaataaaccgagt
gaaaatggggagagcgacattgctagtctgtcaactttatttgcaaacagaaagaagggg
catttcatgaagggtgatgcagttgttgtcatcaggggtgatctaaaaaatttgaaagga
tgggttgagaaagtggatgaagagaatgttcatatcagaccagaaatgaaaggcctccct
aaaaccattgctttaaacgagagagacctttgtaaatacttcgaacctggaaatcatgtg
aaggttgtttctggcacccatgaaggagcgaccggcatggttatcaaagttgaccagcat
gtgcttatcattctgtctgatacaacaaaagaagatgtccgggtgtttgctgatcatgtt
gttgagagctcagaagtgacaacaggtgctaccaaaataggagactatgaaatccatgac
cttgtgcttctggataatctgagctttggggtaatcatacgactggaaagcgaagctttc
caggttcttaaaggggtcgcagagagaccggagatcgttcttgtcaaactcagagaaatc
aagtgcaaaattgagaggaaatccgatgcacaagatcgatacaaaaataccgtctccgtg
aaagatgttgtcagagtcattgagggtcctagcaaaggtaagcaaggtccagtgatgcat
atttataaagggatcttatttataaatgaccgtcatcaccttgagcatgctggatttatc
tgcgctaaatgtacgtcatgtgttgttgttggagcaccacgtcccggtactgatagaaat
ggtgattccatgtcaaggtttggcactttcaagacaccggccccagtgccccaatctcct
aggagatctcaacgaggaggcatgggatataactcgggagggagacatagaggaggaaga
gggggtcatgatgcgttggtgggtaccaccgtgaaaatccgactgggtcctcacaaggga
tataggggtcgtgtagtggaagtcaaaggcccgtcagtacgggtggaactcgagtctcag
atgagagttgtgatagttgaccggaatgcaatatcggataacgtggttgtgacaccgatg
agagacacatctcggtatggtatgggaagtgaaacgcctatgcatccttctcggacacct
cttcatccatatatgactccgatgcgggattctggagctacaccgatccatgatgggatg
agaacccccatgcgtgatagagcttggaacccatacacgcccatgagtccacatagggat
agtaactgggaagaagggaatccggcgtcatggggaacaagccctcagtatcagcccgga
agtcctccttctcgagcctatgaagcaccgacacctggctccggatgggctagtacccct
agcggtagttacagtgatgccgggacaccaagggacaacagttccgcctatgccaatgcc
ccgagtccttatcttccatctacgcacgggcaacccatgacgccaaactcggcatcttac
ttgccccgcactccaggaggacaacctatgactcctggaaccggtcttgatgtcatgtcc
cctgttatcggtggagatgccgaagcgtggtttatgcctgatattctggtagaagtgcac
aaggctggagaggataccgatgtgggagtcattcgagatgttcttccggacgggtcgtgt
aaagtggcgatggggtcaggcggggaaggggaggccgtgttggccctcccgaacgaaatg
gagatagtgccgccgaggaagaacgacagagtgaagatagtaggaggatcgtatagaggg
tcgactggtaaactaataggggttgatgggtccgacggtatcgttaggttagatgacagc
cttgacgtcaagattcttgatttggctctcttagctaaattagccatatga
DBGET
integrated database retrieval system
