Tarenaya hassleriana (spider flower): 104798895
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Entry
104798895 CDS
T04125
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thj03009
]
104798895
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
104798895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_WDR75_1st
WDR54
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
PEP5_VPS11_N
VPS8_N
SYF2
S-Me-THD_N
Motif
Other DBs
NCBI-GeneID:
104798895
NCBI-ProteinID:
XP_010519418
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MEVLVVASSSIDGGIGCWDLRTGKEQLRYKSCASPAHGLTAVGQSFLAASQLRNASASSG
SVFYWYWTKPQVEVKSFPVEAIKPLAANSGGTYIVGGGSSGDIYLWEVATGKLLKKWHGH
YRSVTRLVFSEDDSLLVSGSQDGSVRVWSLLRLFDDFHRQQGNHLYEHSFNEHTMPVTDV
VMDYGGCNAIMVSASEDRTCKVWSLSKGMLLRNIVFPSTINALALDPGGTLFYAGGKDGK
IYIGALNAKSDYGTQTLGSVSEQSKAVTCLAYCAEGNLLLSGSEDGLVHVWDPKTCDIVR
AFSHAKGPVNNVQIVRRPVAANPYSSNKMQSSWKRHGSSLPPPLEKYETSREEMTDDTVM
VDLPAPDVPVFTTYCSSHTINNQVKEFQQQGSAATEIEMERMRHELKKSSQMIHQWQKTY
ENLHQLCVTELLGDQQTDCSR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttggtcgtggcttcatcgtcaatcgatggcggaatcggatgttgggatctg
agaaccggaaaggagcagctacgctacaagtcctgtgcgtcgccagcgcacggtctcact
gccgtcggccaaagtttccttgccgcctctcagctccgcaacgcctctgcttcctccggc
tccgttttctactggtattggactaagcctcaagtggaagttaagagctttccggtggag
gcaataaagcctcttgccgcaaacagtggaggaacttacatcgttggtggtggatcctcc
ggggatatttatctttgggaggttgcgactggaaagttgcttaagaagtggcacgggcac
taccgttcggttacgcgcttggtgttctcagaagatgactctcttttagtttcagggtct
caggatgggagtgtcagagtctggtctctgttaaggctatttgatgatttccataggcag
caagggaaccatctatacgaacacagttttaatgaacatacaatgcctgtaaccgatgtt
gttatggactatggtggctgcaatgcaatcatggtctctgcttcagaagatcggacttgc
aaggtttggagcctgtcgaagggtatgttgttgagaaatattgtctttccttcaaccatt
aatgcacttgcattggatcctggtgggactttgttctatgctggtggcaaagatgggaag
atttatatcggtgcacttaacgccaaaagtgactatggaacacagactcttggttcagta
tccgaacagagcaaggccgtgacttgcttggcatattgcgcagaaggaaacctcctactt
tctggatcagaagatggcttggttcatgtttgggaccccaaaacgtgtgatatcgtccgt
gctttcagccatgcaaaaggtcctgtgaacaatgttcaaatagttagaagaccggttgca
gccaatccctatagttctaacaaaatgcaatcttcatggaaaagacatggatcatcgtta
ccgcctccgttagaaaaatatgaaacttcaagagaagaaatgacggatgatacggttatg
gttgatctgccagctcctgatgttcctgttttcactacatactgcagctctcacacaatc
aacaatcaagtaaaagaatttcagcaacaaggctctgcagcaactgaaattgagatggag
agaatgagacatgaactcaagaaatcatcacagatgatccatcagtggcagaagacgtac
gagaacttgcatcagttatgcgttacagagcttctgggagatcagcaaaccgactgttcc
cgttga
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