Tarenaya hassleriana (spider flower): 104799069
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Entry
104799069 CDS
T04125
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104799069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104799069
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104799069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
AAA_19
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104799069
NCBI-ProteinID:
XP_010519701
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MAESESSKILSSSSSSSSSSDDYDHHFHQEKVGITNVASTSKKPMQTERKSRGKDKKYEK
RVEQKPQKEEKRVAKQYKNIVFTCGKCGSTASTVAGCDNSPTQTVEAAGGGLNKLPSPKA
SRIKESVSDRRSEILPPGPRAADENSNKPVSTDVARAKDSVSIGSNRKAENPLTGTRADE
EELTKVASANASRAEDSVSVGSERKYGKQQLKTEIEHCPKSSGHRTKELDVFSILVNSVW
GKQRIGEEEPGSSPRQEEPQEQEETRGEDKYDADGFLVVQPPPLVLNFKFGEDEPEPEIP
EWEIENQQLFDEFALLLKSGETEIDISSDITKESAVDEHPLARCEKGNHELELDLEIGLK
CIHCGFIETEIRHMDVSEWRGDIFNSRRRSAGGTEREDKTFFEKLGFPVLTKNSSTECGG
ESDGTVWDVIPGTKSQLYPHQQEGFEFIWRNIAGTIHRDKLDDYEKSDDENRGCIISHAP
GTGKTRLTIVFLQSYMELHNNCRPMIIAPASLLLTWEEEFKKWNMDVPFHNLNNVDFSGN
ESSVAMDIFEKRGQGSRSHNDVRMVKLFSWSTEKSILGISYNLFEKLAGDDVEKRKKKKK
SEAILDKEREDIRKILLEIPGLLVLDEAHTPRSQRSCIWKTLTKVTTQKRILLSGTPFQN
SFLELCNVLCVARPAYLSKFSSMLKKSKMTVLRRRRRKDGRDSASAVHINNDGIDELKSL
MDPFVHVHKGSILQKSLLGLRDCVVVLNPPALQKRILESIPNSKNVFEVDHKRSVVSIHP
SLISCCTLSKEELLVLDETLLDQLKRSRLEPNESVKTRFLMEFIGLCNAVNERVLVFSQY
IDPLSLIMEQLGCVFNWLEGKEVLYLHGKLEQNQRQLLINKFNDPKSEARVILASIKACS
EGINLVGASRVVLLDVVWNPAVERQAISRAYRIGQKRVVYTYHLVMKGSLECQKYCQQAE
KHRISELMFSSRHEKAKSKSCSEAVLEDKVLDQMVQHAKLGEMFEKLIYQPKEADLVESF
NSVFP
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatcagagtcttcaaagattttgagttcatcatcatcatcatcatcctcgagt
gatgattatgatcaccattttcatcaggaaaaagtcggaattaccaatgtagcttcaacg
agcaagaaacccatgcaaacagagaggaagtccaggggaaaggataagaaatatgagaag
agggtagagcaaaagcctcagaaggaagagaaaagagtggcgaaacagtacaagaacatt
gtgtttacatgtgggaaatgtggctctactgcttccacagtcgctggctgtgataattcc
cccacccaaactgtggaagctgcaggcgggggtttgaacaagcttccttctcctaaagca
tcacgaattaaagaatctgtttcagacagaagatctgaaatcctacctcctggtccaaga
gctgcagatgagaattccaacaagcctgtttcgacggatgtagcaagagctaaagattct
gtttccatcggctccaatagaaaggctgaaaacccgcttaccggtacgagagctgatgag
gaggagctgactaaggttgcttcggccaatgcgtcaagagctgaggattctgtttctgtg
ggttcagagagaaaatatggaaagcagcagctgaaaactgagattgagcattgcccgaaa
agctcggggcataggactaaagagcttgatgttttcagtattcttgtgaattctgtttgg
ggaaaacaaaggataggagaagaggaacctggttcttcgccgcggcaagaagaacctcaa
gaacaagaagaaacgagaggcgaagacaagtatgatgcggatggatttctagtggtacag
ccgcctccattggtgttgaacttcaagtttggagaagatgagcctgaaccggagattccc
gagtgggaaatagagaaccagcaattatttgatgaatttgcacttctcctgaaatcagga
gaaacggagatcgatatttcttccgacattactaaggaatcggcagtggatgagcatccc
ttggcgcgctgtgaaaaaggaaaccacgaactcgaacttgatcttgaaatcgggctgaag
tgtattcattgtggttttatagagacggagatccgtcacatggatgtatcggagtggcgg
ggagacatatttaatagccgaaggaggagtgcaggtggaacggaacgtgaagacaagaca
ttctttgagaaactcggattccctgtcctcacgaagaacagttccaccgaatgtggaggt
gaatcagatggaacagtctgggatgtgataccgggaactaagtctcagctctatccgcat
cagcaggagggtttcgagtttatatggaggaacatagccgggacaattcacagggataag
ctcgacgactatgagaaaagcgacgatgaaaacagaggatgcatcatctctcatgccccg
ggaacaggaaagactcgtctcacgatagttttccttcagtcatatatggagctccacaac
aactgcaggcccatgattattgctcccgcgagtttgctcctcacatgggaagaggagttc
aagaaatggaacatggatgttccctttcacaatctgaacaatgtggatttctcggggaat
gagagttcagtggcaatggacatatttgagaaaagggggcaaggttcaagaagccataat
gatgtaagaatggtgaagctattctcatggagtacggagaagagtatcctcgggatcagc
tacaacctctttgagaaacttgctggagatgatgtcgagaagagaaagaagaagaagaag
agcgaagccatactcgacaaagaacgagaggatatcaggaagatccttcttgaaataccc
gggttgcttgttcttgacgaagcacacacccctcggagccaaaggagttgtatatggaag
acactgacaaaagtaacaacgcagaaacggatcttgctctccggaacacctttccagaac
agttttctcgagctctgcaacgtattgtgcgttgcaagacctgcatacctgtctaagttc
tcatcgatgctcaagaagagtaaaatgacggtattgaggagacggagacggaaagatggt
agagattctgcttcagctgtacatatcaacaatgatggaatcgacgagctcaagagcctt
atggatccatttgtacatgttcacaaaggaagcatccttcaaaagagccttctcgggttg
agagactgtgtagtggttctaaaccctcctgcactccagaagaggattctcgaatcaatt
ccaaactcgaaaaacgtgttcgaagtcgatcacaagaggtctgtggtctcgattcaccca
tctctgatttcttgttgcaccttgtccaaggaagaactgttagttcttgacgagactttg
cttgaccagttgaagagatccagactcgaaccaaatgaaagcgtaaagacaagattcctg
atggagttcatcgggttatgcaatgcggtaaacgagagagttctggtgttcagccaatac
atcgatcctctgtctttgataatggagcagctggggtgtgttttcaactggttagaaggc
aaagaagtgctctacctgcatgggaaacttgaacaaaaccaaaggcagctactgatcaac
aaattcaacgacccaaaatccgaagcaagagtcatattggcttcgattaaagcatgctcg
gagggaatcaacctggtaggagcatcaagggttgttcttttggatgttgtttggaacccg
gctgtggaacgacaagccataagccgtgcttaccgaattggacagaaacgggtagtgtac
acataccatttggtaatgaaggggtctctcgagtgccaaaagtactgccaacaagccgag
aaacatagaatatcggagctgatgttctcttcccgacacgagaaagcaaagtcaaagagt
tgttctgaagctgtgttggaggacaaagtgttggatcagatggttcaacatgcgaagctc
ggggaaatgtttgagaagttaatctatcaacccaaggaagcggatttggtggagagtttt
aactcagttttcccgtga
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integrated database retrieval system
