Tarenaya hassleriana (spider flower): 104799261 Help Entry 104799261         CDS       T04125                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism thj  Tarenaya hassleriana (spider flower) Pathway thj03040   Spliceosome Brite KEGG Orthology (KO) [BR:thj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104799261  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:thj03019]     104799261    03041 Spliceosome [BR:thj03041]     104799261 Messenger RNA biogenesis [BR:thj03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      104799261 Spliceosome [BR:thj03041]  Complex B   Other components    Prp19-related factors     104799261  Complex C     104799261 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 UTP6_C Motif Other DBs NCBI-GeneID:  104799261 NCBI-ProteinID:  XP_010519980 LinkDB All DBs Position Unknown AA seq 927 aa AA seqDB search MSISKELYPSEEDLLYEEEILRNPFSLKLWWRYLIAKSEAPFKKRFIIYERALKALPGSY KLWHAYLRERLDIVRNLPVTHPQYETLNNTFERALVTMHKMPRIWIMYLQTLTKQKLITR TRRTFDRALCALPVTQHDRIWEPYLVFVSQEGIPIETSLRVYRRYLMYDPTHIEDFIEFL VRSGRWQETAERLASVLNDDQFYSIKGKTKHKLWMELCELLVHHANEISGLNVDAIIRGG IRKFTDEVGMLWTSLADYYIRKNLLEKARDIYEEGMMKVITVRDFSVIFGVYSRFEESTV AKSLEMISSSDEEDNENKENGVEEEEEEEEEEDARLDTSLTVRELERKILHGFWLNDDND VDLRLARLEDLMDRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPAKQILTFTEAVRTVD PMKAVGKPHTLWVAFAKLYENYKDLANSRVIFDKAVQVNYKHVDHLASVWCEWSEMELRH KNFNGALELMRRATAEPSVEVKRKVAADGNGPVQMKLHKSLRLWSFYVDLEESLGTLEST RVVYERILDLRIATPQIILNYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSK FVKRYGKTKLERARELFEHAVSMAPAESVKTLYLQYAKLEEDYGLAKRAMKVYEEATKKV PDDQKLEMYEIYIARAAEIFGVPRTREIYEQAIESGLPHKDVKTMCIKFAELEKSLGEID RSRALYKYSSQFADPRSDPEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTNFILP ENMMQKDKRLDVEEAKDELKKAGLPEDEMAALERQLTSATSKSVGFVSAGIVVTQSGDQD NVKAPTSMNQEDIELPEESDESEGEDDRMEISQKEVPSAVFGGLARKRDAEDGNGEAEDG NNGRLGALARIKRPKREGNNQDAEAKS NT seq 2784 nt NT seq  +upstreamnt  +downstreamnt atgtcgatatctaaagaactgtatccttctgaggaagacttattgtacgaggaagagatt cttcgaaatccttttagtctgaagctatggtggaggtatctgatcgccaaatccgaagcg ccgttcaagaagaggttcatcatttacgagcgagctttgaaagcgcttcctggtagctat aaactatggcatgcttatctccgggaacggctcgatattgtgaggaatttgccggtcact cacccgcaatacgaaaccctcaacaataccttcgaaagagctctggttactatgcataag atgcctaggatatggatcatgtatcttcagaccttaacgaagcagaaactgatcactagg acccggaggacatttgacagggcgctctgtgctctaccggtcacgcagcacgacaggatc tgggagccgtatcttgtattcgtgagccaagaaggtattcctattgagacctctcttagg gtttataggcggtatctcatgtatgatcctactcacattgaggattttattgagtttttg gtgaggtcgggtcgttggcaagagactgcagagagactggcttcggtgttgaatgatgac cagttttattctattaaagggaagacgaagcacaagctgtggatggagttgtgtgagttg cttgtgcatcatgccaacgagatttcgggtctcaatgtcgatgctattatcaggggaggc attagaaagtttacggatgaagtagggatgctttggacttctcttgctgattattacatc aggaagaatttgcttgagaaagccagggatatctatgaggagggtatgatgaaagtgatt acagtgagggacttcagtgttatatttggtgtttattcaaggtttgaggaaagcacagtt gcaaaaagtttggagatgataagttcgagcgatgaggaggataatgaaaacaaagagaat ggtgtagaggaggaggaggaggaggaggaagaagaggatgctcgccttgatacttctttg acagtgagagagcttgagaggaagatattgcatgggttctggttgaacgatgataatgat gttgatttacgattggctcgtttggaggatctgatggacagaaggcccgaactggcaaac agtgtcctcctgagacagaatcctcacaatgtggaacaatggcatcgtagagtaaagata tttgaaggaaacccggcaaagcagatactgacattcacggaagcggtaagaaccgtggac ccaatgaaagcagttggaaagcctcacactttatgggttgctttcgcaaagttatatgaa aattacaaagacttggccaattcgagagtgatattcgacaaggcggtccaagtgaactac aaacacgtggaccatctggctagcgtgtggtgtgaatggtccgagatggagttaaggcac aagaatttcaatggggcgctcgagctaatgaggcgtgccaccgctgaaccatctgtagaa gtcaaacggaaagtggctgccgatgggaacggaccggtccagatgaagctgcataaatcc ttgaggctttggtcattttacgttgatttggaggaaagtctcggaactttggaatcaaca agagtggtgtatgagaggatattggatctaagaatagctacccctcaaatcattctgaat tacgcgttccttctcgaggaaaacaagtatttcgaggatgcattcaaggtttacgaaaga ggcgtcaagattttcaagtatcctcacgtgaaagatatatgggtaacttatctttcaaag tttgtcaagagatatggaaaaaccaaactggaacgagctcgagagctgttcgagcatgct gtttcaatggcaccagcagaatcagtgaagaccttgtatcttcagtatgcaaagctagaa gaagattacggtctggcaaagcgagccatgaaggtttacgaggaagcgaccaagaaggtt ccggatgatcagaagcttgagatgtatgagatatatatcgctcgtgcagctgagatcttc ggagttccaagaacaagggagatatacgagcaagcaatagaatccggtctccctcacaag gatgtgaagacaatgtgcatcaaatttgcagaactggagaaaagcttgggagagatcgac cgttctcgtgcattgtacaagtattcatctcagtttgcagacccaagatccgaccctgaa ttctggaacaaatggcatgaattcgaggttcagcatggaaacgaagataccttcagagaa atgctccgtatcaagagaagtgtctctgccagctacagtcagacgaatttcatcctgccg gagaatatgatgcaaaaggacaaaaggctcgacgtggaagaggcgaaagacgagctgaag aaagcgggattgcccgaggacgaaatggccgcactggagaggcaactgacctcagccacc agcaagagcgtagggtttgtgagcgcgggaatcgtcgtgactcaatccggtgatcaggac aatgtgaaggctccgacatctatgaaccaagaggacatagagttgccggaagaaagcgac gagtcggaaggagaagatgatagaatggagatatctcagaaggaggttccttctgcggtt ttcggagggcttgcccgtaagagggatgcagaagacggcaatggcgaagcagaggatggc aacaatggccgccttggtgctttggcgagaatcaagaggccgaagcgagaagggaacaat caagatgcagaagcgaagtcttag

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