Tarenaya hassleriana (spider flower): 104799560
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Entry
104799560 CDS
T04125
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104799560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104799560
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104799560
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104799560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
ScoMcrA_N
Motif
Other DBs
NCBI-GeneID:
104799560
NCBI-ProteinID:
XP_010520453
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MLIDSDRDLCNSGTKREPNSVLIREVWAENLESEFELIREVIDDYPFVSMDTEFPGVIFK
AEPAVLRRNNRPSDLYKLLKSNVDELCLIQVGLTLSDSDGNLPDLRTGGRNRFIWEFNFR
DFDVERDAHAPNSIELLRRQGIDFDRNRREGVDSGRFAELMMSSGLVCNEAVTWVTFHSA
YDFGYLVKILTRRRLPSACEEFLRLLRVFFGQRVYDVKHMMRFCEKRLYGGLDRLARSLE
VNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVEDGPEKHAGVLYGLEVF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgattcggacagagatctctgcaattccggcacgaaacgggaacctaactcg
gtcctgatccgtgaggtttgggcggagaatctggaatcggagttcgagctgatccgagag
gtgatcgatgactacccatttgtctccatggacacggaatttcccggcgtgattttcaag
gccgaacccgccgtcctccgccgcaacaaccgcccctccgacctctacaagctcctcaag
tccaacgtcgacgagctctgcctcatccaagtgggtctcacgctgtcggattccgacggg
aacctccccgatctccggaccggaggcaggaaccggttcatctgggaattcaacttcagg
gacttcgacgtggagcgtgacgcacacgcgccgaactcgatcgagctcctccgccgtcag
gggatcgatttcgaccggaaccgccgggaaggcgtagactccggtcggttcgcggagctg
atgatgtcgtcgggtttggtctgcaacgaggccgtgacatgggtaacgttccacagcgcg
tacgatttcgggtacctggtgaagattctcacgcgccgccgtctccccagcgcgtgcgag
gagtttctccggcttctgagggtattcttcggacagagagtgtacgacgtgaaacacatg
atgaggttctgcgagaagagactgtacggagggttagaccggttagcccggtcgctggag
gtgaaccgtgcggtggggaaatgccatcaggccggttcggacagcttactgacgtggcat
gcgtttcagaggatgagggatttgtacttcgtggaagatgggccggagaaacatgccggc
gttttgtacggtctggaggttttttga
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