KEGG   Tarenaya hassleriana (spider flower): 104799861
Entry
104799861         CDS       T04125                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104799861
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:thj03041]
    104799861
   03036 Chromosome and associated proteins [BR:thj03036]
    104799861
Spliceosome [BR:thj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104799861
 Complex B
    104799861
 Complex C
   U2 SnRNP specific factors
    104799861
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    104799861
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 HEAT_ECM29 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N DUF1467
Other DBs
NCBI-GeneID: 104799861
NCBI-ProteinID: XP_010520843
LinkDB
Position
Unknown
AA seq 1268 aa
MASVDPEITKTQEERRKMEQELASLTSLTFDRDLYGGTDRDAYVTSIPVVDEEDANPDPA
GSEVARRLASYTAPKSLLNDVARSQGEDDDGGFKARKSIADREDDYRRKRLNRVLSPDRN
DPFAMGEKTPDPSIRTYADHMKETALQKEREETMRLIAKKKKEEEEAAEKGQKESAPAAA
QPKRRNRWDQSEDDGGAAAVKKAKSTSDWDLPDAAPGIGRWDATPTPGRVSDATPSAGRR
NRWDETPTPGRVTDSDATPAGGVTPGATPAGVTWDATPKGLATPTPKRQRSRWDETPATM
GSATPMAGATPAAYTPGVTPIGGVDLATPTPGQINLRGALTPEQYNLLRWERDIEERNRP
LTDEELDAMFPQEGYKVLEPPASYVPIRTPARKLLATPTPMATPGYIIPEENRGQQYDVP
KEVPGGLPFMKPEDYQYFGALLNEDDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALR
QLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDELVRPFVHKILVV
IEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVAS
ALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDE
NQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLM
DAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFRH
FWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIDKVVT
NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTI
KWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGA
LKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWM
RICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAI
AIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDA
LMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEG
MRVALGSAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDALVAAYPILEDEQNNVYS
RPELMMFI
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggcgtctgtagatccggagatcaccaaaacgcaagaggagaggcggaagatggagcag
gagctcgcgtccctcacttcgctaactttcgatcgcgatctgtacggaggcactgaccgt
gatgcctacgtgacttcaatccccgtggtcgacgaggaagatgcgaatccggaccctgcc
gggtcggaagtggcgcggcggcttgcgtcttacactgctccgaagtcgcttctcaatgat
gtggcccgtagtcagggcgaagatgacgatggagggtttaaagcaaggaagagtattgca
gacagagaggatgactataggaggaagagactcaatcgggttttgtctccggacagaaat
gatccgtttgcgatgggagagaagacgccggatccaagtattagaacttacgcggatcac
atgaaggaaacagcattgcagaaagagagggaggagactatgaggcttattgctaagaaa
aagaaagaggaagaagaagccgcggaaaagggacagaaagaatctgctcctgctgctgct
cagccgaagaggaggaaccgatgggatcagtcggaagatgatggtggtgccgcagctgtg
aagaaggctaagtcaacttcggattgggacttaccggatgcggctccagggatcgggcgg
tgggatgcaacaccgactccagggagagtttctgatgccaccccatctgctgggcgtagg
aatagatgggacgagacgccgactcctggtcgtgtgacagactctgacgccacaccagct
ggtggggttactcccggtgcgacgcctgcaggagttacttgggatgcgactccaaaagga
cttgctactcctaccccgaaacggcaacgttctaggtgggatgagacaccagccactatg
ggcagtgctacacccatggctggagctactccagccgcttacactcctggtgtcacccct
atcggtggggttgatctggctacccctacaccaggccagattaatcttcgtggcgctctc
acgcctgaacagtacaatctgttgaggtgggagagggatatcgaggagagaaacaggcct
ttgactgatgaagagcttgatgctatgtttcctcaagagggttacaaggttcttgagcca
cctgcttcatatgttcccatccgaacccctgcgagaaaacttctcgcaacaccaacaccc
atggcgactcctggatacattattcctgaagaaaatcgtgggcagcagtatgatgtgccc
aaggaagttcctggcgggttgccatttatgaaacctgaggattatcagtattttggagcg
ttattgaatgaggatgatgaagaggagctgtcccccgaggagcagaaagagcgcaagata
atgaaactgttgttgaaggttaaaaatggaacgcctccccagaggaaaacggccctgagg
cagcttactgacaaggctcgtgaattgggcgctggtcctttgtttaataagattttgcct
ttgctcatgcaacccactttggaagatcaagagaggcatctgttggtcaaagtgattgat
aggattctgtataaattggatgagttggtaaggccttttgtccacaaaattcttgttgtc
atcgagcctttgttgattgatgaagattattatgcacgtgtggaaggaagagagattatt
tctaaccttagcaaggctgctggtttagctaccatgattgctgctatgcgtcctgatatt
gacaacattgatgaatatgtgaggaacacaaccgctagagctttcagtgtcgtagcttca
gcacttggaattcctgcacttttgcccttcttgaaagctgtgtgtcagagcaagaagtca
tggcaggcacgtcatactgggattaagattgttcagcagattgctatcttgattggttgt
gctgttctacctcatctaaggtctctagtcgaaattattgaacacgggctcaatgatgaa
aatcagaaggtgaggactattactgctttgtctcttgctgcccttgccgaggcatctgcg
ccatatggtatcgagagctttgactctgtcctgaagcctctgtggaaaggtatcagatca
caccgcggtaaggtattggctgctttcttgaaggcaattggtttcatcatcccattgatg
gatgctatatatgctagctactatacaaaagaagtgatggttattctgatccgggagttc
cagtctcctgacgaggagatgaagaagattgtcctcaaggtggtgaagcagtgtgtgagt
acagagggtgtcgaagctgattatattcgcagcgatattctccccgagttcttcaggcac
ttctgggtaaggagaatggcgctggacaggagaaactataaacagctcgttgaaactacc
gtagagattgcaaacaaggttggggtcgctgatatcgtagggagagttgtcgaagatctt
aaagacgagagtgagccctacagacgtatggttatggagacaatcgataaggttgtcacg
aacctgggggcatctgatatcgacgctagattggaggaattgctcatcgacggaattctt
tacgctttccaagagcagaccagtgacgatgctaatgtgatgcttaacgggtttggtgca
gttgtgaatgctctaggacagcgagtgaagccataccttccacagatttgtggtaccatc
aagtggcgattgaacaacaagagcgcaaaggtaagacagcaggctgccgatcttatttct
agaatagcggttgtaatgaagcaatgtggagaggaacagctgatgggccatctcggtgtt
gtcctgtacgaatatctcggagaagagtacccggaagtcttgggatcgattcttggagcc
ctcaaatctatcgttaacgtgattggtatgacgaagatgactcctcccattaaggacttg
cttccgagattgaccccgatcttgaagaacaggcacgagaaggtgcaagagaactgtatc
gatctcgttggtaggatcgccgatcgtggtgccgagtttgttccggccagggagtggatg
agaatctgttttgagcttcttgaaatgctcaaggcccacaagaagggaatccgtcgtgcc
actgtcaatacctttggatacattgccaaagccattggaccacaagatgtattggcaacg
ctgttgaacaatctcaaagtccaagaacgtcagaaccgtgtctgtacaaccgtggcaatc
gccatcgtggcggaaacatgttctcccttcacagtcctaccggcactgatgaacgagtac
cgtgtccccgagcttaatgtccagaatggcgtcctgaagtcactctccttcctgtttgag
tacattggcgagatgggcaaagactacatatatgcagtgacgccattgctggaggacgcg
ctcatggacagagacctggttcacaggcagacggcagcatcggccgtgaagcacatggcg
ttgggcgtggctggtctgggatgtgaagacgcattggtccatttactgaactatgtatgg
cccaacatatttgagacgtcgcctcacgtgataaacgcagtgatggaggccatagaaggg
atgagagtggcattgggctcggccgtcgtgcttaactattgcctgcaggggctgttccat
ccggctcggaaggtcagggaagtgtactggaagatctacaactcgctttatatcggcggt
caggatgcgctggtggcggcctacccgattctcgaggacgagcagaacaatgtctacagt
cgacccgagcttatgatgttcatctaa

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