KEGG   Tarenaya hassleriana (spider flower): 104800207
Entry
104800207         CDS       T04125                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03030  DNA replication
thj03410  Base excision repair
thj03420  Nucleotide excision repair
thj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104800207
   03410 Base excision repair
    104800207
   03420 Nucleotide excision repair
    104800207
   03430 Mismatch repair
    104800207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thj03032]
    104800207
   03036 Chromosome and associated proteins [BR:thj03036]
    104800207
   03400 DNA repair and recombination proteins [BR:thj03400]
    104800207
DNA replication proteins [BR:thj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104800207
  DNA Replication Termination Factors
   ELG1-RFC complex
    104800207
Chromosome and associated proteins [BR:thj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104800207
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104800207
  Check point factors
   HRAD17(Rad24)-RFC complex
    104800207
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_22 AAA_16 AAA_11 ATPase_2 AAA_assoc_2 AAA_5 AAA_14 AAA_30 AAA_24 DUF815 DNAX_ATPase_lid ResIII RuvB_N AAA_7 AAA_3 bpMoxR AAA_19 nSTAND3 AAA_2 TniB SLFN-g3_helicase AAA_28 ABC_tran Mg_chelatase
Other DBs
NCBI-GeneID: 104800207
NCBI-ProteinID: XP_010521268
LinkDB
Position
Unknown
AA seq 362 aa
MAEVDSAMEIDVEENQQPRKLINKGKAVAMGSSRESKATPWVEKYRPQSLEDVAAHRDII
DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR
QQIQDFASTQSFSFSGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVN
KIIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVTESGLSAVVRLSNGDMRKALNI
LQSTHMASQQITEEEVYLCTGNPLPKDIEQISYWLLNESFAESYEKISEMKTRKGLAIVD
IVKEVTMFVFKIKMPSDVRIQLINDLADIEYRLSFGCNDKLQLGGVISAFTQARSVLVGA
AK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcggaggtggattccgcgatggagatcgacgtggaagagaatcagcaacctcgtaag
ctcataaacaagggaaaagccgtcgccatgggttcgtcgcgagagagcaaggcgacgccg
tgggtcgagaagtatcggcctcagtctctcgaagacgtcgctgctcaccgagacatcatc
gatacgattgataggttgacgaacgagaacagattacctcatcttctgttgtatggtcct
cctggtacgggcaaaacatcaacgattctagctgttgcccggaagctatatggagcccag
tatcataatatgattcttgaactaaatgcatctgatgatagagggattgatgttgtaagg
caacagattcaagattttgctagcacacagagcttctcattcagcggaaaatcttcggta
aagttggtcttgctagatgaagcagatgccatgacgaaagatgctcaattcgccctgcgt
agagtaattgagaaatacacaaagaacactcggtttgctctcatctgcaatcatgtcaac
aagatcatcccagctttacagtctagatgtactcgatttagatttgctcctcttgatcct
gttcatgtgagtcaacgtctcaagcatgtcattgaagctgaagggcttgacgtaactgag
agtggtttatcggccgttgtacgtttgagcaacggggacatgagaaaggctttgaacatt
ttgcagtcaacacatatggcttctcagcaaataacagaggaagaggtatatctatgcact
ggaaatccattgcccaaggacattgagcagatatcttactggcttctgaatgaatccttt
gccgaaagctacgaaaagatatccgaaatgaagacaaggaaaggactggccattgttgat
attgtcaaagaggtgacaatgtttgttttcaagatcaagatgccgtcagatgtcagaatt
cagttgatcaatgatttagcagacatagagtacagattgagctttgggtgcaacgataaa
ctgcagctcgggggagtgatttcggcattcacccaagcacgttcggtcttagttggtgct
gcaaaatga

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