Tarenaya hassleriana (spider flower): 104800254
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Entry
104800254 CDS
T04125
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104800254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104800254
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104800254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
104800254
NCBI-ProteinID:
XP_010521331
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MVLSPVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGGNSPGLMPDWKVGECVATWW
RPNFETMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFHFNMVSS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgttatctccggtggtgaacacgtaccctttgtcgaactacagcttcgggaccaag
gagccgaagctggagaaggacacctccgtcgccgatcgtctcgctcgtatgaaagtcaac
tatatgaaggagggcatgaggactagcgttgaagggattctattggtacaagagcacaac
catcctcacatacttctcctgcaaattggtaacacattctgcaaacttcctggtggacgt
ttgaagccaggagaaaatgaaattgagggcttgaaaagaaagttaaccagcaagcttgga
ggtaactcgcccggtctcatgcctgactggaaggtaggtgaatgcgtggccacatggtgg
cgtccgaacttcgagacaatgatgtatccgtattgccctcctcacatcacaaagccaaag
gagtgcaagaggctcttcatagttcacctgtcggagaaagagtactttgcagtgccgaag
aacttgaaactcttggccgtcccactgttcgaactctacgacaatgttcagagatatgga
ccggtgatatcgaccattcctcagcagctgtcgagattccatttcaacatggttagttct
taa
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