Tarenaya hassleriana (spider flower): 104800567
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Entry
104800567 CDS
T04125
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
thj04131
]
104800567
Membrane trafficking [BR:
thj04131
]
Protein recycling
Others
EARP complex
104800567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
DUF2533
Motif
Other DBs
NCBI-GeneID:
104800567
NCBI-ProteinID:
XP_010521709
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MQPNLFPFGTVLGNPFLFNGGDLSEFGAEGFGSSSSRVFFLVPFLLSQGGEMDLSKVGEK
IISSVKSARSLGLLPSPSSSDRPEIPARAAAAAAVARALAGLHPDQGISSSSNELSSIYG
RGPPPQEVDEIEEGFYEEDFDPVRHVLENVPDDENDHAYFEKQATIRLAQLDRVAENLSH
HVMEHHEVMVKGMNLVRELERDLKIANVICKNGRRHLTSSVNEVSRDLIVNTHSKRKQAL
LDMLPILTELCHARDMRLTLEALVEEGNYCKAFQVLSEYLQLLDSLSEFSAIQEMTHGVE
VWLGRTLHKLDSLLLGVCQEFKEERYLTVLDAYALIGDVSGLAEKIQSFFMQEVISETHS
VLKAIAQEDNGAAMQNTRFTYSDLCLQIPESKFRHCLLRTLDVLFRLMCSFHEIMSFEPE
KKVEDLITTSLGATQNVNLVTGNSNSPQDALCSASESSSRPSGIVSVEELSTLSPTDGTG
TSSSVQLKSDSGISEGRDSRDAVSTSESPWYHLRKEGAAFVSETLQRGRRNLWQLTTSRV
SVLLSSPVGSSTSIHQFLKNYEDLNIFILAGEAFCGFEAVEFRKKLKGVCETYFSSFHRQ
SMHALKMVLEKETWTKLPPDTVQAINFTGLVGDGAPLIISSRGASASSSFLQLNNMSNNS
VAQSANRGGFSYWLKSGNPFSAKLTCYREGQDDSLYSGVASGDREVNDSTLEDSVSPDQR
DVRRVNGVSPVSEDENEDLLADFIDEDSQLPSRSFKHGHSRSLSSHLSTNDDFTAQTGSS
LCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVFEIFGQESPSGKGFSDYLNHR
LKSSLTRISQDCEQWIKPRLSPSSSSLPGFPHAVHSLSDVTPSNPLNIISGHLLGTSFGL
KERCAAAETISLVARILHKSKAHLQSMLMSRNGAVVEDFFGQLVDSVPALTEHIHRTTAK
ILLHVNGYVDRIANSKWEVKELGMEHNGYVDLMLGEFKHYKTRLAHGGIHQEVQNLLLEC
GVEIVSETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVPVNVKPKLQIVETFIKAY
YLPETEYVHWARAHPEYTKSQIAGLVNLVAAMKGWKRKVRLEVLEKIES
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaatctcttcccattcggcacagttttggggaatccgtttctgttcaatggc
ggggatctgagcgagtttggtgctgaaggcttcgggagctctagttctagggttttcttc
ttggttcctttcttgttgtcccaaggaggtgagatggatttgtctaaggtcggcgaaaag
atcatcagctccgttaagtccgcgagatcgcttggacttttgccttctccttcttcctcg
gaccgtcctgagattccagcccgtgctgctgctgcagctgctgttgctcgtgctttggca
gggctgcatcccgatcagggtatctcttcaagctctaatgaactgagctccatatatgga
cgtggtcctccccctcaagaagttgatgagattgaagaaggattctatgaggaggacttt
gatccagtaaggcatgttttggagaatgtgccagatgatgagaatgatcatgcttatttt
gagaagcaggctaccataaggctggcacagctggatagagtagcagaaaatctgtcccat
catgttatggagcatcatgaagtaatggtgaaggggatgaatttggttagagaattggaa
agagatttgaagattgcaaatgtcatctgcaagaatggaagaaggcatttgacttcatca
gttaacgaggtgtctagagatctcattgtaaacactcattctaaaaggaagcaagccctt
ctggacatgcttcctatattaactgagctttgtcatgcaagagacatgcgattaactctt
gaagccctcgtcgaggaaggcaactattgcaaggcatttcaagttctatctgagtacttg
cagctgcttgatagtctttctgaattttcagcaatccaagaaatgacccatggggttgag
gtttggctaggaagaactcttcacaaactggattcattgttattaggagtttgccaggag
ttcaaagaagagaggtatctaacggtacttgatgcttatgcactgatcggtgatgtctct
gggcttgcggagaagatacaaagcttttttatgcaggaagttatttcagaaacccattct
gtactgaaggccattgctcaagaggacaatggtgctgccatgcaaaatactagatttacc
tacagcgatctatgtcttcagatacctgaatccaagtttaggcattgtcttttgagaaca
cttgatgtgttatttcggttgatgtgttcgttccacgagataatgagtttcgaaccggaa
aagaaggtagaagatttgatcaccacaagtttgggtgcaactcaaaatgtgaatttagtg
acaggaaattctaacagccctcaagatgctctctgttcagcctcagaatcaagttccaga
ccttctggtatagtttctgtagaagagctctcaaccttgtctccgactgatggaactgga
acctccagttcagtgcagctaaaatctgacagtggaataagtgaaggtagggattctaga
gatgcagtgtcgaccagtgagtcgccatggtatcatctacgaaaagaaggtgcagctttt
gtgtcagaaacccttcagagaggacgcagaaatctctggcaacttacaaccagtcgtgtg
tcagttttgctttcttcccctgttggttcttcaacaagtattcatcagttcttgaaaaat
tacgaagacctgaacatcttcatccttgccggggaagcattctgtggatttgaagcagtt
gaatttaggaagaagctaaagggtgtatgcgaaacttatttcagttcatttcataggcaa
agcatgcatgcgcttaaaatggttttggagaaggagacttggactaaattgccacctgat
actgtgcaagctattaattttactggtcttgtgggggatggagctccactgattatttct
tctcgtggtgcctctgcttcttccagttttctacagcttaataatatgtcaaataactca
gttgctcagagtgccaacagaggtggattctcttattggctgaaaagtggaaaccccttt
tcagcaaagttaacttgctatagagagggtcaagatgactctttgtatagtggagttgct
tctggagatcgtgaagtaaatgatagcacgcttgaggatagtgtatctccagatcagaga
gatgtaaggcgcgtgaatggagttagtcctgtttcagaagatgaaaatgaggaccttctt
gctgacttcatcgatgaggatagtcagcttcctagccgaagctttaaacatggtcattca
agaagtctgtcttcccatctgagtaccaatgatgattttacagctcaaacaggatcttct
ctttgtctactaaggtcaatggataagtatgcaaggcttatgcagaaactggaaatagtt
aatgtcgagttctttaagggaatatgccaattgtttggggtttttttctatttcgtattt
gaaatatttggtcaagaaagccccagtggaaaaggtttttctgactatctcaaccatcgg
ctgaagagcagcttaactcgaatatcacaagattgtgagcagtggataaaacctcggtta
tcaccatcttcatcttctttaccgggctttcctcatgcagtccatagtcttagtgatgtg
acaccttcaaatccccttaacatcatttctggtcacttattgggcacgtctttcggtctc
aaggaaagatgtgctgctgcagagactatatctcttgttgcccggatattgcataaatca
aaggctcatctccaatcaatgcttatgtcgagaaatggagctgtggttgaagacttcttt
ggtcaactggtcgattccgtacctgctctaacggagcacatacacaggacaactgcaaag
atactgctccatgttaatggatatgtcgatcgaattgctaattctaaatgggaagtcaag
gagcttggaatggagcataatgggtacgttgatttgatgcttggagaattcaaacactac
aaaacacggcttgcccatgggggtattcatcaggaggtacaaaatctcctgctggaatgt
ggagttgaaatagtttcggaaacgctggtagaaggtttatcacgagtaaagagatgcacc
gacgaagggcgtgctctcatgtcattggatctccaggttctgattaacgggcttcagcat
tttgttccggtgaacgtgaagccgaagctccaaatcgtcgagacctttatcaaggcgtat
tatttaccggagacagaatacgtccactgggcaagagctcatccggaatacacgaaaagc
cagattgcggggttagtaaatctagttgcggcgatgaaaggttggaagaggaaggtgcgg
ttggaagttctggagaagatcgaatcgtag
DBGET
integrated database retrieval system
