KEGG   Tarenaya hassleriana (spider flower): 104801217
Entry
104801217         CDS       T04125                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03018  RNA degradation
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104801217
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104801217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104801217
   03041 Spliceosome [BR:thj03041]
    104801217
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104801217
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104801217
Spliceosome [BR:thj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104801217
 Complex C
  U2 snRNP components
    104801217
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C
Other DBs
NCBI-GeneID: 104801217
NCBI-ProteinID: XP_010522691
LinkDB
Position
Unknown
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKFPHMLSVRNC
FIRGSVVRYVQLPPDGVDVDVLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttttcttactttaaggatttggtcggaagagaagtgacggttgagctgaag
aacgatttagcgattagagggactctgcattctgtggatcagtacctgaatatcaagctc
gagaacactagggttgttgatcaggacaagttccctcatatgctctcggtgagaaactgc
ttcatcagaggatctgtggtgagatacgtccagttaccacctgatggagtcgatgttgat
gttcttcatgacgccactagaagagaagcaaggggtggctga

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