Tarenaya hassleriana (spider flower): 104801217
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Entry
104801217 CDS
T04125
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104801217
09123 Folding, sorting and degradation
03018 RNA degradation
104801217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104801217
03041 Spliceosome [BR:
thj03041
]
104801217
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104801217
mRNA degradation factors
5'-3' decay
Lsm complex
104801217
Spliceosome [BR:
thj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104801217
Complex C
U2 snRNP components
104801217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
Motif
Other DBs
NCBI-GeneID:
104801217
NCBI-ProteinID:
XP_010522691
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKFPHMLSVRNC
FIRGSVVRYVQLPPDGVDVDVLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttttcttactttaaggatttggtcggaagagaagtgacggttgagctgaag
aacgatttagcgattagagggactctgcattctgtggatcagtacctgaatatcaagctc
gagaacactagggttgttgatcaggacaagttccctcatatgctctcggtgagaaactgc
ttcatcagaggatctgtggtgagatacgtccagttaccacctgatggagtcgatgttgat
gttcttcatgacgccactagaagagaagcaaggggtggctga
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