Tarenaya hassleriana (spider flower): 104801271
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Entry
104801271 CDS
T04125
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03430
Mismatch repair
thj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104801271
03460 Fanconi anemia pathway
104801271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104801271
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104801271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104801271
NCBI-ProteinID:
XP_010522786
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MEGSSASGSPLIRPINRSVVRRICAGQVILGLSSAVKELVENSLDADATSIEINLKDYGE
EYFQVIDNGCGISPNNFKVLALRHHTSKLEDFPDLQNLTTFGFRGEALSSLCAMGNLTVE
TRTKNESVATHLTYDRSGLLIDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK
LVSLLNAYALIAKEVRFLCSNTAGKNPKSVVLNTQGRGSLKDNILTVFGINTFTCLQPVN
ICLSEDCRVEGFLSKPGQGSGRNLTDRQYFFVNGRPVDMPKVSKLLNELYKGTNSRQYPV
AILDFTVPGKACDRNVTPDKRKVFISDETSIICSLREGLHEIYSANDASYIVNKMMEHDN
LEEKIGIASPPEKSNFLEKGFVLDSGPSTHVEEAIEKEISPSRSTKIDAECSDNEVGNNL
MLEKFKFENRTHGIKKGDDAVSAHDNILFTTPLRKTTTQVVSCSEVKEKVTAVNKTSSNQ
SSLNDFVTVKKRKHQNVSIVLSEVPVLRNQALNLPTEKSVFEVPALSARCLMNTGHLDGS
VGTKVSRTEIAFDELGDQNSLGDCTDNIRREARPQLHLLDEEKHETSAHFKDPISDNTLV
EEELGRILEDNSWGSRSLPTVATMLDSPAQSSGPKMFSTLKFSFQDLRMRRLERLSRLQN
KRYVSKNMKMLQQRRCFAAATLELSQPENEERKARALAAATSELERLFRKEDFRRMQVIG
QFNLGFIIAKLDKDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLRLELAPEEEVTVS
MHMDVIRQNGFILEENPNGRPGCHFRLRAVPFSKNITFGVEDLKDLISTLGDNQGDCSVI
SRYKTNKTDSVCPSRVRAMLASRACRSSVTVGDPLGKNEMQKIVEHLAGLESPWNCPHGR
PTMRHLVDLTTLHSLPDEDVAAIP
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggagggttcgtctgcaagtggctctccattgataaggccgattaacagaagcgtggtt
cgcagaatctgcgccgggcaggtcattttgggcctgtcgtcggctgtgaaggagctggtg
gagaacagcttggacgcggacgccaccagcatcgaaatcaacctcaaagactatggtgaa
gagtactttcaggtcattgataatggctgcggcatttcaccgaacaacttcaaggttctc
gcccttaggcaccatacttctaaactggaagatttcccggatctccagaacttgactaca
tttggtttcagaggagaggcattaagctcactttgtgccatgggcaatcttacggtggag
acaaggacaaaaaacgagtcagtggcgacacacttgacctatgatcgttcgggcttgctc
atagatgagaagaagacagcacgtcaaatcggtaccactgtcactgtcaaaaagttgttc
tcaaatttacctgtgcgaagcaaagagtttagtcgcaatatacgcaaagagtatgggaaa
cttgtctctttgttgaatgcatatgcacttattgcaaaagaagtgcggtttctctgctcc
aacacggctggaaaaaatccaaagtctgttgtgctgaacacacaaggaaggggttccctt
aaagataacatcttaacagtgttcggcattaacacctttacatgtctgcagccagtaaat
atttgtttatcggaggattgcagagttgaagggtttctttccaagccgggacagggtagt
ggccgcaatttgactgatcgacaatatttctttgtaaatggccggcctgtggatatgccc
aaagtgagcaagttgttgaatgagttatataaaggcacgaattctcggcaatatccagtt
gccattctggatttcaccgtgcctggtaaagcatgtgaccgaaatgtcacgcctgataaa
agaaaggtgttcatttcggatgagacctccattatttgttctctgagggaaggtttgcat
gagatatattctgcaaatgatgcatcttatatcgtcaataaaatgatggagcatgacaat
ttagaagaaaaaataggaattgcatctcctcctgagaaatcaaacttcttggaaaaaggg
tttgttttggatagtggtccgagcacccatgtagaggaggccatcgaaaaggaaatttct
ccatcgaggagtaccaagatagatgctgaatgctctgataatgaagttggtaacaatttg
atgctggagaagtttaaatttgagaatagaacacatgggattaagaaaggggatgatgct
gtctctgcccatgataatattctgtttacgactcctcttcgcaagacaactacccaagtt
gtgtcttgcagtgaagtgaaagagaaagttactgctgtaaataaaacttcaagcaatcag
tcaagtttgaatgattttgttactgtgaagaaaagaaagcatcaaaatgtgagtatcgtc
ttatcagaagtacctgtactgagaaatcaggctctaaacttaccaactgagaaaagcgta
tttgaagttcctgctttgtctgctagatgcctgatgaacacaggtcaccttgatggttca
gttggcacgaaggttagcagaaccgagattgcctttgatgaattaggagaccaaaattct
cttggagactgtactgataatatcaggagagaagcacgacctcagttacatctactggac
gaagagaagcatgaaacatctgcacacttcaaagatccaatatcagacaacacactagtt
gaggaagaacttggaaggattttggaggacaattcatggggcagtcggtcattgccaact
gttgccacaatgctggactctccagcccagtcttctggaccaaaaatgttttccacctta
aaatttagttttcaggaccttcggatgaggaggttagaaagactctcgagattacagaac
aaacgttatgtatctaaaaacatgaagatgctccagcagaggagatgttttgctgctgct
acattggagctctctcaaccagaaaatgaagagcgaaaagcaagagctttagctgcggcc
acttctgagttggaaaggcttttcagaaaggaggatttcaggagaatgcaggtgattggg
cagttcaatctcggcttcatcattgcaaagttggacaaagatttattcattgttgatcag
catgctgcggatgagaaattcaactttgagcacttagcaaggtcaacggtcttgaatcaa
cagcccttgcttcagcctctgagattggagctcgctccagaagaagaagtcactgtctca
atgcacatggatgtgatcaggcagaatggctttattttagaagagaatccaaatggtcgc
cctggatgccactttaggctaagagctgttccctttagcaagaatattacctttggtgtc
gaagatcttaaagacctaatctcgacacttggagacaaccaaggggactgttccgttatc
agtcgatacaaaaccaacaaaacagattcggtgtgcccatcacgagttcgtgcaatgctt
gcatcccgtgcatgcagatcttctgtgacggttggagatccattgggaaagaatgagatg
cagaagatagtagagcatttggccgggctggagtcgccttggaattgcccgcatggacgt
cctacaatgcggcatcttgtggacttgacaaccttacattctctacccgatgaagatgtt
gccgccattccttga
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