Tarenaya hassleriana (spider flower): 104801874
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Entry
104801874 CDS
T04125
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thj03021
]
104801874
Transcription machinery [BR:
thj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104801874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Response_reg_2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104801874
NCBI-ProteinID:
XP_010523561
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MGVVSVSSSAARSPLGLSNNILTQRSALKRPSVVAFKADKSSHSALVIPREKILLPAEQP
KEKRVPRKNPKKSKSSDTNVAPSSALDVDYNEAAARLESIFKLSTATTRKVPSRRKRKDD
SDEKKTTTKTAKMVVSNKTKRRKRLSLDKRISLKRNNQEKSAVASVQKKTVKRLQEDEKM
DRLVRDYSASTDIVSLDWKKMKIPPVLSSIEHSWLFKLMQPMKALLQVKDELQKNLGREP
TDAEVADGANMSVAEAKRRIEIGRAARNKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQ
AGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTRVPFGLESVRVEIQRAK
LELLFELGRVPTGSEIVERLGISPERYREVVIAAKPVLSLNSRHAVTQEEFIDGITDFDG
VGSDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVR
KHEVKALMKLKHPARVDYLRRYIV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtatctgtttcaagttcagctgcaagatctccccttgggttaagcaacaat
attttaacacaacggtctgcactgaaaaggccatccgttgttgcgtttaaagcagataaa
tccagccactcagctttagtcattccccgagaaaagatcttgttgcctgcagagcaacca
aaggagaagcgagtaccgaggaaaaacccgaagaaatcaaaatcctcggatactaacgtg
gctccttcatcagccttggatgtggattacaatgaagcagccgccagacttgaaagcata
ttcaaactcagtactgcaaccacaaggaaagtcccgagtaggaggaaaaggaaggacgat
agtgacgagaaaaaaaccacgacaaaaactgctaaaatggttgtaagtaacaagaccaag
aggcggaagcgtttgagtcttgataaacggatttctctgaaaagaaacaaccaagagaaa
tcggctgtcgcttccgtgcagaagaaaacagtaaagagactgcaagaagatgagaagatg
gataggctcgtgagggactattcggcttcaaccgacatagtcagcttggactggaagaag
atgaagatacctcctgttctttcctcaattgagcattcttggttgtttaagttgatgcaa
ccgatgaaggctcttcttcaagttaaagatgagctgcaaaagaacctgggaagagaaccg
acagatgctgaagtagctgacggcgccaatatgagcgtggccgaagcaaaaaggcgaatt
gaaatcggtagagctgcaaggaataaacttatcaagcacaatctccggctggttttgttt
gtgatgaacaaatatttccaagattttgcaaatggaccgaagttccaagacctctgtcaa
gccggagtgaaagggcttatcacagcaattgaccgctttgagccaaacaggaagttccgt
ctatcaacatatggtttgttttggatcagacatgccattatacgctcaatgacaacttcg
agctttactcgtgtcccgtttggtctcgaatcggtaagagtagaaatccagagagcgaag
cttgagctgttgttcgagcttggaagagtgcccacagggagtgaaatagttgagagactc
gggatatcccctgagaggtaccgtgaagtagtgatagctgcaaaaccggttctttcgctt
aattcgagacatgcagttacccaagaagaattcatcgatggtattacagattttgatggt
gtcggttctgataaccggagacaacctgctcttctcaggcttgctctcgacgatgtattg
gattcgctgaagccgaaagagagtttggtgattcgccaaaggtacggtcttgatggaaaa
ggcgacagaacactgggtgagattgccggaaaccttaacatctccagagaaatggtgaga
aaacacgaagttaaagccttgatgaagctcaagcaccctgcccgtgttgattatctccgt
cgctacattgtctga
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