Tarenaya hassleriana (spider flower): 104802204
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Entry
104802204 CDS
T04125
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104802204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
thj04121
]
104802204
Ubiquitin system [BR:
thj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104802204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_NXF1-5
F-box
LRR_FBXL18
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
104802204
NCBI-ProteinID:
XP_010523990
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All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MQKRFALSFPEEVLEHVFSFIQSDTDRNSVSLVCKSWYGIERWCRRKVFVGNCYAVGPAT
VIRRFPEVRSVELKGKPHFADFNLVPDGWGGYVHPWVEAMSTSYTWLEEIRLKRMVVTDE
CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRECDVEDVSGHWLSHFP
DSYTSLVSLNISCLSSEVSFSALERLVSRCPNLKSLRLNRAVPLERLATLLQRAPQLVEL
GTGGYTAELRPDVFSSLSAAFSGCKGLKSLSGFWDAVPAYLPAIYSACSGLTTLNLSYAT
VQSSDLVKLLSQCQKLQRLWVLDYIEDVGLEALASSCKDLRELRVFPSEPFVMEPNVSLT
ERGLVCVSEGCPKLESVLYFCRQMTNAALVTIARNRPNLTRFRLCIIEPKAPDYMTLQPL
DVGFGAIAEHCKKLQRFSLSGLLTDKVFEYIGTYAKKLEMLSVAFAGDSDLGMHHVLSGC
DNLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDE
RGPPDSRPDSSPVERVYIYRTVAGPRFDMPGFVWNMDEDSTMRFSRQIAT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaggttcgccttgtcgtttcctgaagaggtgctggagcacgtcttctcgttc
atacagtcggacacggaccgtaactcggtgtctctggtctgcaagtcgtggtacgggatc
gagcgatggtgccggaggaaggtctttgtcgggaactgctacgccgttggacccgcgact
gttatccggcggtttccggaggtaagatccgtggagctgaagggaaaaccacacttcgcc
gacttcaatctggtgcctgacggctggggaggatacgtgcacccttgggttgaggcgatg
tcgacgtcgtacacgtggctggaggagataaggctgaagaggatggtggtcaccgacgag
tgcctggagctcatcgccaagtcctttaagaacttcaaggttctcgtgctttcttcctgc
gagggattctccaccgatggtctcgctgccatcgccgccaattgcagaaatctgagagag
cttgatttgcgagagtgtgatgtggaggacgttagtgggcactggctcagtcatttcccc
gattcatacacatctttggtatcccttaacatctcgtgcttatcatctgaggtcagtttc
tctgctttggagcgtctggtgagtaggtgtcctaatctgaagtctctccgactcaaccgt
gctgtccctctggaaaggcttgcgaccttacttcagagagcaccacagttggttgagctg
ggcaccggtggttacacagctgaactgcgaccagatgttttttcaagtttatctgctgct
ttctccggttgcaaagggctgaagagcttgtctgggttttgggatgctgttcctgcatat
cttcctgcaatttattctgcttgcagtggacttacaacattgaacctgagttatgctact
gttcagagttctgatcttgtcaagcttctcagtcagtgtcagaaattgcagcgtctttgg
gtattggattacattgaggatgttggccttgaggcgcttgcatcaagctgcaaggaccta
cgggaattgagagtgtttccctctgagccctttgtcatggaaccaaatgtgtcattgaca
gaacgagggcttgtctgtgtttccgaaggctgtccaaaactagaatcagttctctatttc
tgccgtcaaatgacaaatgcagccttagtcacaatagccaggaaccgtcccaacttgact
cgtttccgtttatgcatcattgagccaaaagctccagactacatgactctgcagccgctg
gatgtgggttttggagcaatagcagagcactgcaagaagctacagcggttctcactctcg
ggccttctgactgacaaggtgtttgaatacattgggacctatgcaaagaagttggagatg
ctgtcagtcgcatttgccggggacagtgaccttgggatgcatcatgttctgtccgggtgc
gataaccttaggaaattagagataagggactgcccctttggggacaaagcgctcctggcc
aatgcttctaagctggagacaatgcgatccctttggatgtcttcatgctccgtgagtttc
ggggcgtgtaagctgcttggccagaagatgccgaggctcaacgtggaagtcattgacgaa
cggggtccacccgactctcgaccagacagctcccctgtcgagagggtctacatatacaga
acagtggcaggtcctaggtttgacatgcctggcttcgtgtggaacatggacgaggactct
accatgaggttttcccggcaaattgcgacatga
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