KEGG   Tarenaya hassleriana (spider flower): 104802332
Entry
104802332         CDS       T04125                                 
Name
(RefSeq) LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104802332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:thj03041]
    104802332
Spliceosome [BR:thj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    104802332
 Complex C
   U5 SnRNP specific factors
    104802332
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_HPS5 eIF2A Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_RIG_1st Beta-prop_DCAF12 RMC1_N Nbas_N
Other DBs
NCBI-GeneID: 104802332
NCBI-ProteinID: XP_019056704
LinkDB
Position
Unknown
AA seq 335 aa
MEIVTRENENALSGPKPMDWSTVPYSTPQASGKQRTSSLEAPIMVLTGHQSSIYTMKFNP
AGTVIASGSHDREIFLWRIHGDCKNFMVLKGHKNPVLGLHWTTNGSQIVSASPDKTLRAX
KQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWGMRQRGAIQTFPDEYQITAVSF
SDASDKIFTGGIDNNIKVWDLRKGEVSITLQGHQDTITGMSLSPDGSYLLTNGMDCKLRI
WDMRPYAPLDRCIKILEGHQNNFEKNLLKCGWSPDGSKVTAGSSDQMVYVWDTVSRRILY
KLPGHTGSVNESVFHPHESIIGSCSSDKQIYLGEI
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggaaattgtcacgagagagaatgagaatgctttgtcaggtccaaaaccgatggattgg
tccactgtcccgtatagtactccccaagcatctggcaagcagcggacatcgagtttggaa
gctccaattatggtgctaactgggcatcagagttctatatacaccatgaagttcaacccg
gctggaactgtgatcgcctctggatcccatgatagagaaatattcctctggagaatccat
ggtgactgcaaaaacttcatggtcttgaagggtcataagaaccctgtcctcggtcttcac
tggaccactaatggctcccagatcgtatcagcaagccctgataaaacccttagagcantg
aaacaaatcaagaagatggctgaacactcgtcctttgtgaattcttgctgcccttcgcgt
agagggccacctcttgtagtcagtggctccgacgatggaactgccaagctttggggcatg
cgtcagagaggcgcaatacaaacattcccggatgaataccaaatcacggccgtctctttc
tctgatgcgtcggacaagatcttcaccggtggtatagacaacaacattaaagtttgggac
ttgagaaaaggcgaagtgtccattacgcttcagggccatcaagatacaataacggggatg
agtctaagtcccgacggttcataccttctgaccaacggcatggactgcaagctccgcata
tgggacatgcggccatacgccccactagaccggtgcataaagattttagaagggcaccaa
aacaacttcgagaagaacctgctgaaatgtggatggtcacccgatggtagcaaagtcacg
gctggtagctcggaccagatggtttacgtgtgggacacggtatcgaggcgcattctgtac
aagctccctggtcacactggctctgtcaacgagtccgtcttccatccacatgaatctatc
atcggatcttgcagcagcgataaacagatttatctgggagagatctga

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