Tarenaya hassleriana (spider flower): 104802400
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Entry
104802400 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104802400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
thj03041
]
104802400
03009 Ribosome biogenesis [BR:
thj03009
]
104802400
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104802400
Spliceosome [BR:
thj03041
]
Complex A
U1 snRNP components
U1 related factors
104802400
Complex B
104802400
Ribosome biogenesis [BR:
thj03009
]
Eukaryotic type
Pre-60S particles
Helicases
104802400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104802400
NCBI-ProteinID:
XP_010524303
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MPAMASTATATSTVRYAPEDPTLPKPWKGLVDGRTGYLYFWNPETNVTQYERPSFSAPPP
KSSSVSINSSVQVQQSSSGQHRGYSPGNKDDKSGRESDDGSKVESGSRFTERPPYFEDTS
NGLGNSAFGGSSARGPPSAAAAGNGLSSEAYRSRHEITVTGDLVPPPLMSFEDAGFPPEL
LREVHSAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHIKRFHSDPRM
GPTVLVLSPTRELATQIQDEAVKFGKSLRISCACLYGGAPKGPQLREIERGVDIVVATPG
RLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTKRQTLMYTATWPKEV
RKIAADLLVNPVQVNIGNVDELVANKSITQHVEVVAPMEKHRRLEQILRSQEPGSKIIIF
CSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDYVLNQFRTGRAPVLVATDVAARGLDIK
DIRVVINYDFPTGIEDYVHRIGRTGRAGATGLAHTFIGEQDGKHASDLIKILEGANQRVP
PEIREMASRSGGMNKVRRWGPASGGRNGGSGYGGRDYAYGGRGDSGHGGRGSWGSRDRYY
ENGRERERSRSPTRSSSYGWGGSRDRERGPPPPSTRSFH
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctatggcttctacagcaactgccacgtctacagttcgctatgcacccgaagat
ccgactcttcccaagccatggaaaggtcttgttgatggtagaactgggtatctgtacttc
tggaatcctgagaccaatgttacccagtatgagagaccaagtttctcggctcctcctccc
aagagttcttctgtctcgataaattcttctgttcaggttcaacaatcttcttctggacaa
caccgtggttacagtcctggcaacaaggatgataaatctggtagagaaagtgatgatggg
tccaaggttgaatctggatcaaggtttaccgagagaccaccatattttgaagacacctca
aatggactaggaaattctgcattcggtggatcatcagccagaggaccaccatcagctgca
gctgcaggaaatgggctgtcttcagaggcttatcgtagtcgtcatgaaataactgtcact
ggggacctggtaccgccacctttaatgtcttttgaagatgctggttttcctccagagctt
ctgcgggaggtacacagtgctggattttctgctccaactccaattcaagctcagtcatgg
ccaattgcattgcaaagtagagacatagtagccattgctaaaacaggctctggaaaaacg
ttgggttacttgattccagggtttatgcatatcaaacgcttccacagtgatccacgaatg
ggtccgacagttctggtattgtcaccaacaagggagttggccacacagattcaagatgaa
gctgttaagtttgggaagtcattgagaatttcttgtgcgtgtttgtatggtggcgcacca
aagggtcctcaacttagagagatagaaagaggagtagatattgttgtcgcaactcctgga
cgattgaacgatatcctcgaaatgaggagaatcagccttcatcaggtctcttatcttgta
ctagatgaggcagatcgaatgttggatatgggatttgagcctcagataaggaagatagtg
aaagaggttcctactaagcgccagaccctcatgtacacagcaacatggccaaaggaggtg
aggaaaattgcagctgacctccttgtcaaccctgtccaggtgaacattggcaatgttgat
gagcttgtggcgaacaagtccattacacagcatgttgaagttgtggcgccaatggagaaa
catcgaaggctagagcagatattgaggtctcaagaacctggttcaaagatcataattttc
tgctcaaccaagaagatgtgtgatcaactagcacgtaatctgacccgtcaatttggagct
gctgctatacatggagacaagtcccagggtgagagggactatgtactgaatcagtttcgt
acgggcagggctcccgtgcttgtggcgactgatgttgctgctcgtggacttgacattaaa
gacatcagggtggtcatcaattatgattttcccactggaatagaggattatgttcacaga
atcggaagaactggaagagctggagcaactgggctggcacacacattcattggggagcaa
gatggaaagcatgcatcggatctgataaagattctagaaggagcaaatcagcgagtgcct
cccgagatacgtgaaatggcttcacggagtggtggaatgaacaaggtgaggcgctgggga
cctgcctctgggggtaggaatggagggtctggctatggtggacgtgattatgcgtatgga
gggcgtggtgattctggtcatggggggagaggtagctggggttcgcgtgacaggtattat
gagaacggaagagagagagagaggagcagaagccctacgagaagcagtagttatggatgg
ggcggcagcagggatcgtgaaaggggaccacctccaccttccacccgtagcttccattag
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