KEGG   Tarenaya hassleriana (spider flower): 104802411
Entry
104802411         CDS       T04125                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03013  Nucleocytoplasmic transport
thj04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104802411
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104802411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104802411
   04131 Membrane trafficking [BR:thj04131]
    104802411
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104802411
Membrane trafficking [BR:thj04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    104802411
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104802411
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104802411
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_Vps41 WD40_Gbeta Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 104802411
NCBI-ProteinID: XP_010524317
LinkDB
Position
Unknown
AA seq 302 aa
MPAQKIETGHEDMVHDVQMDYYGKRVATASSDCTIKIIGVNSSGGSQHLATLTGHRGPVW
QVAWAHPKFGSILASCSYDGQVTIWKEGNQNEWTQAHVFTEHKSSVNSIAWAPHELGLSL
ACGSSDGNISVFTARADGGWDTTRIDQAHPVGVTSVSWAPSTAPGALVGSGLLEPVYKLA
SGGCDNTVKVWKLYNGSWKMDCFPALQMHSDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WTVGKEGEQWEGKVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTLWKEAVDGEWQQVSVV
EP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctgcccaaaagatcgaaacgggtcatgaggacatggtccatgatgtgcagatggat
tactatgggaagcgtgtagccactgcctcatctgactgcacgatcaagataattggcgtg
aacagcagtggtggatcgcagcacctagctaccttgacaggacacaggggtcccgtctgg
caggttgcttgggctcatccaaagtttggttcgatcttggcttcgtgttcatatgatgga
caagtcacaatctggaaggaaggtaaccaaaacgaatggacacaggctcatgtcttcacc
gagcataagtcatcagtgaactctatcgcgtgggcaccccatgaactcgggctctccttg
gcatgtggttcatctgatggaaacatatcggttttcacagccagggctgacggtggctgg
gacacgactaggatagaccaagcccacccggtcggcgtcacttcagtctcatgggcacca
tccacagccccaggtgcccttgttggttctggtctgcttgagccggtttacaagctagca
tctggtgggtgcgacaacaccgtgaaagtgtggaaactctacaacgggtcgtggaagatg
gactgtttcccggctctacagatgcacagtgactgggtcagggacgtggcatgggcgccg
aacttgggtctgccgaaatccacaatagcgagtgcttcacaagacgggacagtggtgata
tggacagtggggaaggaaggtgagcaatgggaaggtaaggttctgaaggatttcaagacg
ccggtgtggagagtctcatggtcgttgaccggtaacttgttggcagtctcggacggcaac
aacaacgttaccttgtggaaagaagctgttgatggtgaatggcaacaagtgagtgttgtc
gagccctag

DBGET integrated database retrieval system