Tarenaya hassleriana (spider flower): 104802481
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Entry
104802481 CDS
T04125
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104802481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104802481
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104802481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
DUF677
ATG17_like
FapA
COG3_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
104802481
NCBI-ProteinID:
XP_010524415
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSGFSFGQSSSGGGFSFGSSSSAGTSSASSTQSFSFNTSSNPSSAASSGLSFGSSFSSSA
SPFSSGFGFSASSSGTAPSLFGSSSSAAAAATPTPGSSPFGASSPTFGFGASTPSQSGIS
SFATGSAPSPFGASSLAAGSAPSPFGTSSSAAGSTPSPFGTSLSAVGSSPSLFGASPAAA
SSTPSLFGASSSAAGSTSPLFSAPSSAAGSKPSLFSASSSIGSTPSLFGASFSATGSTPS
LFGASSSAAGSSPSIFGASSSAASSTPSIFGAPISSASSSGASSSATGSLPSIFGASSSG
IASSSSLFGASSSATPGSAPSLFGASSAASAATTAATSTPLFGSASAGFSFPKSSMAATT
ASAPSQTSSSSSPTSSFSFGTPPTSGSQPSLGFNVAAAFSAPASSTPAAVFSTATTTTTS
STPAATSTPTLSAAASVPAFPSLAVASSAASTPASSAATSSTTGLFTGFASSSAAASGTT
SSFTGFSVSKASTPASSSQAQTTSAAPAFSVPSLTTTAVTVASSAATTTQTSLVVSSTAG
MSTTAVAPVAATPKLPSEITGKTVEEIIKEWNTELQERTARFRKQANAIAEWDKRILQNR
DVLLRLEIEVAKVVETQASLERQLELIETHQQEVDKALQSMEEEAERIYNDERRLLLDDE
AASTRDAMYEQSESIERELEHMTEQIRSIIQVVNANQGGELEAIDGMTPLDVVVRILNNQ
LSSLMWIDEKAEEFSSRIQKLASQGSASDMMVPRHWMS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttctcattcggccaatccagctccggcggcggattctcgttcggatcctcc
tcctccgccggaacttcttcggcttcatccactcagtcgttctccttcaacacatcttca
aaccctagctccgccgcgtcctctggtcttagcttcgggtcctctttctcgtcctccgct
tctcccttctcatctgggtttggcttctccgcatcttcctccggcactgctccgtcactg
tttggatcttcctcttccgccgccgccgccgccacccccacccccggttcttctccattt
ggagcatcttctccaacttttggattcggtgcttcaacaccctctcagtctggtatttcc
tcttttgcgactggatctgctccatctccgtttggtgcttcctctttagccgccggctca
gcaccatccccctttggtacgtcttcgtcagccgctggttcgacaccttcccccttcggt
acgtccttatcagccgtgggttcgtccccctctctctttggtgcatcccccgccgctgct
agttcaacaccatctctctttggcgcgtcctcttcagcggccggttcgacttcgccccta
tttagcgcgccctcctcagccgctggctcgaaaccatccctctttagcgcgtcctcgtca
atcggatcgacaccgtccctcttcggcgcgtcgttttcggccactggatcgacaccatcc
cttttcggcgcctcctcatcggccgctggttcgagtccgtccatttttggtgcgtcatcc
tcagccgccagttcgacaccctccatatttggggcgcccatttcatccgccagttcgtcg
ggggcgtcctcgtcagccaccggttcgttgccttccatcttcggggcgtcctcatcagga
atcgcttcgtcgtcgtccctcttcggtgcgtcctcgtcggccacgcccggttctgcccca
tccctatttggagcatcttccgcagcctcagccgcaaccaccgctgcgacctccactccc
ttgtttggctcagcatctgcaggattttcttttccgaaaagctctatggcagctaccact
gcttctgctccttcgcagacgtcttcatcgtcttccccgacttcttccttctcatttggc
acacccccgacttcaggttctcaaccttctctgggatttaatgtcgcagctgcattttca
gcaccggcatcgagcacaccagcggcagtgttttctactgcgaccactaccaccacttca
tccactccggctgccacaagcacacccactttgtcagccgctgcttctgtcccggcattt
ccttctcttgctgtggcttcatctgccgccagtactcccgccagttccgctgctacatca
tctaccactggactattcactggttttgcaagctcgtcggctgctgcctctgggactact
agctcttttactgggttttccgtatccaaggcatcaacgcctgcctcatcttcacaagcc
caaactactagtgctgcacccgcattcagtgttccctctttgactactacagctgttact
gttgccagttctgctgctactacaactcagacatctcttgttgtgtcttcaactgctggg
atgagcacaactgctgtggctccggtggctgctactcctaaattgccatctgagattact
ggaaagactgtcgaagagattatcaaggagtggaataccgagcttcaagagcgcactgct
agattccggaagcaggccaatgcaatagcagagtgggataagcgaatcttgcagaaccgt
gatgttcttttgagactcgagattgaagttgcaaaagtggttgaaacacaagctagtctg
gagcggcagctggaattaattgaaactcatcagcaggaggttgacaaggctttgcaaagc
atggaggaagaggctgagcgcatttataatgatgagaggagattgcttctggatgacgaa
gccgcatcaacacgagatgctatgtatgagcagtctgaatcaatagaaagagagttggag
cacatgacggaacaaatcagatcgattatccaagtcgtaaatgctaaccagggtggggaa
ctcgaggcgattgatggaatgacgccgctcgatgtggttgtcagaatcctgaacaatcaa
ctcagttcgttaatgtggatcgatgagaaggcagaggaattctcgtcgcggatccaaaaa
ctggcttcccagggttctgcttcagacatgatggttccgagacactggatgtcctga
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